Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919943

Identifier: 238919943

GI number: 238919943

Start: 1971444

End: 1972658

Strand: Direct

Name: 238919943

Synonym: NT01EI_2047

Alternate gene names: NA

Gene position: 1971444-1972658 (Clockwise)

Preceding gene: 238919942

Following gene: 238919946

Centisome position: 51.71

GC content: 38.93

Gene sequence:

>1215_bases
ATGAAAGCATTAAATATATTTATATTTTCTATGTTAATTACCTCATTTAACGCAAATGCAACGTTCTCTCTTGTTGCCTA
CGATGAAAGCAGTGGAATTTATGGTGTAGCATTCGCCAGCTGTGTTTACCTACCACCCGACATAGACATAACAGATAAAG
TGAATGCCCTTACACCTATTGGAACAATAACAACACAAGCAACGGTGAACTTTAATAATATAAATTTAAGCAATGGAAAA
GATATGATTCTTAGAAACGTTAGAGGGAATCAGATTCTTGAATGGCTATATGACCATGACCAGGATGGAACTGAAGGGAG
AGATTCAAGACAATTTTTAATATTAAGCAATCCATCATCAGGTCCAGTTGAGGGGTATGTGTTTACTGGTGATGAGGTTC
CTTCCGTCAAAGGGAGCATCATTAGAGATAATCTTGTTATTGCTGGAAACACTCTACATTCTAATACACTGAATGCAATG
CTAGACGGATATATGGAGCAGCGCGATTTTTTTGTTGAAAAATTACTGAGCGGCCTTACGTCTGTACGCGATCGTGGATT
GGGTGATTTGAGATGTGATGGGACATCATCTTATACGGCATTTATAAAGATAAATGATAGAAGTTGGTTTTATAATTCGA
GAGATATTGATGAGGATGCCGTAAGTGGATTGGAGAAACTAATTAATGGAAGACAAAAACCACGGGTATGCCTTAACTTA
GTTTCAGGAACGGCTTTTCTTGCTAATATTGACATAAAAGGAAGCGGTCATTATGTTGGCCCATATGGCGTTGGTAGTAA
AGTCTGCGATGATGCAAAACCGAGGGATATATTTACTCCCCAGCTTAATATTGTGGCAGGGGCACATAAGACATGCCCAA
GTGTAGCTATAGGAGAATATACTGAAATCGTAAATTATGATGCTTGGGGAACCACGTTTTCGCCTCATTGTATCCTTAAG
AACGATCATCTAGAGGTGTATGCTGACCCACATCAAAAAGGTGAATCCTTGAGCATCCTTCAAGATATCTCTGATCTTAG
TCAATATAATTTCTCCAAACGCATATCATCTTTCGCCATCCCTCATGGATGGACGGTACGTTTCTTCGAAGATAAGAATT
TTAGCGGAAATTACTATACTCGTGTTGAGGGTGATACAGAAGCGAGCGCCTTTGATAATAAGGCTAGTTCAGTTCGTATA
CTCAGTCGAGAATGA

Upstream 100 bases:

>100_bases
TTTCTAATGTTATTTTAATTATATTAAATCAATGAATATAACAAATATCGGATTCGCGGCGCGCTTATATGTTTCAATAC
AGATGAGAGAGGTGTGGAAT

Downstream 100 bases:

>100_bases
TGCTTTAGTATAATAATAATCACTTAACGTCATCGTTACTTAATCGGTGTCGCAATGTAAGTATATTTTTTATTGTTTCA
TTTCTGATGCTAAATCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKALNIFIFSMLITSFNANATFSLVAYDESSGIYGVAFASCVYLPPDIDITDKVNALTPIGTITTQATVNFNNINLSNGK
DMILRNVRGNQILEWLYDHDQDGTEGRDSRQFLILSNPSSGPVEGYVFTGDEVPSVKGSIIRDNLVIAGNTLHSNTLNAM
LDGYMEQRDFFVEKLLSGLTSVRDRGLGDLRCDGTSSYTAFIKINDRSWFYNSRDIDEDAVSGLEKLINGRQKPRVCLNL
VSGTAFLANIDIKGSGHYVGPYGVGSKVCDDAKPRDIFTPQLNIVAGAHKTCPSVAIGEYTEIVNYDAWGTTFSPHCILK
NDHLEVYADPHQKGESLSILQDISDLSQYNFSKRISSFAIPHGWTVRFFEDKNFSGNYYTRVEGDTEASAFDNKASSVRI
LSRE

Sequences:

>Translated_404_residues
MKALNIFIFSMLITSFNANATFSLVAYDESSGIYGVAFASCVYLPPDIDITDKVNALTPIGTITTQATVNFNNINLSNGK
DMILRNVRGNQILEWLYDHDQDGTEGRDSRQFLILSNPSSGPVEGYVFTGDEVPSVKGSIIRDNLVIAGNTLHSNTLNAM
LDGYMEQRDFFVEKLLSGLTSVRDRGLGDLRCDGTSSYTAFIKINDRSWFYNSRDIDEDAVSGLEKLINGRQKPRVCLNL
VSGTAFLANIDIKGSGHYVGPYGVGSKVCDDAKPRDIFTPQLNIVAGAHKTCPSVAIGEYTEIVNYDAWGTTFSPHCILK
NDHLEVYADPHQKGESLSILQDISDLSQYNFSKRISSFAIPHGWTVRFFEDKNFSGNYYTRVEGDTEASAFDNKASSVRI
LSRE
>Mature_404_residues
MKALNIFIFSMLITSFNANATFSLVAYDESSGIYGVAFASCVYLPPDIDITDKVNALTPIGTITTQATVNFNNINLSNGK
DMILRNVRGNQILEWLYDHDQDGTEGRDSRQFLILSNPSSGPVEGYVFTGDEVPSVKGSIIRDNLVIAGNTLHSNTLNAM
LDGYMEQRDFFVEKLLSGLTSVRDRGLGDLRCDGTSSYTAFIKINDRSWFYNSRDIDEDAVSGLEKLINGRQKPRVCLNL
VSGTAFLANIDIKGSGHYVGPYGVGSKVCDDAKPRDIFTPQLNIVAGAHKTCPSVAIGEYTEIVNYDAWGTTFSPHCILK
NDHLEVYADPHQKGESLSILQDISDLSQYNFSKRISSFAIPHGWTVRFFEDKNFSGNYYTRVEGDTEASAFDNKASSVRI
LSRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44670; Mature: 44670

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50915 CRYSTALLIN_BETA_GAMMA L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALNIFIFSMLITSFNANATFSLVAYDESSGIYGVAFASCVYLPPDIDITDKVNALTPI
CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEHEEEECCCCCCCCCCCCCCCCC
GTITTQATVNFNNINLSNGKDMILRNVRGNQILEWLYDHDQDGTEGRDSRQFLILSNPSS
CEEEEEEEEEECEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC
GPVEGYVFTGDEVPSVKGSIIRDNLVIAGNTLHSNTLNAMLDGYMEQRDFFVEKLLSGLT
CCEEEEEECCCCCCCCCCCEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVRDRGLGDLRCDGTSSYTAFIKINDRSWFYNSRDIDEDAVSGLEKLINGRQKPRVCLNL
HHHHCCCCCEEECCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEE
VSGTAFLANIDIKGSGHYVGPYGVGSKVCDDAKPRDIFTPQLNIVAGAHKTCPSVAIGEY
CCCCEEEEEEEECCCCCEECCCCCCCHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCH
TEIVNYDAWGTTFSPHCILKNDHLEVYADPHQKGESLSILQDISDLSQYNFSKRISSFAI
HHHEECCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PHGWTVRFFEDKNFSGNYYTRVEGDTEASAFDNKASSVRILSRE
CCCCEEEEEECCCCCCCEEEEECCCCCHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MKALNIFIFSMLITSFNANATFSLVAYDESSGIYGVAFASCVYLPPDIDITDKVNALTPI
CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEHEEEECCCCCCCCCCCCCCCCC
GTITTQATVNFNNINLSNGKDMILRNVRGNQILEWLYDHDQDGTEGRDSRQFLILSNPSS
CEEEEEEEEEECEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC
GPVEGYVFTGDEVPSVKGSIIRDNLVIAGNTLHSNTLNAMLDGYMEQRDFFVEKLLSGLT
CCEEEEEECCCCCCCCCCCEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVRDRGLGDLRCDGTSSYTAFIKINDRSWFYNSRDIDEDAVSGLEKLINGRQKPRVCLNL
HHHHCCCCCEEECCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEE
VSGTAFLANIDIKGSGHYVGPYGVGSKVCDDAKPRDIFTPQLNIVAGAHKTCPSVAIGEY
CCCCEEEEEEEECCCCCEECCCCCCCHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCH
TEIVNYDAWGTTFSPHCILKNDHLEVYADPHQKGESLSILQDISDLSQYNFSKRISSFAI
HHHEECCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PHGWTVRFFEDKNFSGNYYTRVEGDTEASAFDNKASSVRILSRE
CCCCEEEEEECCCCCCCEEEEECCCCCHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA