| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is insQ [H]
Identifier: 238919914
GI number: 238919914
Start: 1946782
End: 1946991
Strand: Reverse
Name: insQ [H]
Synonym: NT01EI_2018
Alternate gene names: 238919914
Gene position: 1946991-1946782 (Counterclockwise)
Preceding gene: 238919915
Following gene: 238919913
Centisome position: 51.07
GC content: 52.38
Gene sequence:
>210_bases ATGCGCCTGCTGTGGTCATACAGCGAAAGAAAACCGCCAGTCACAAAGTCATTCGAGTGTCTGGAATGTGGATATACAGA GAACGCCGATATAAACGGTGCCCGTAATATTTTAGCGGCGGGGCACGCCGCGTTAGCCTGTGGAGAGATGGCAGCGTTAG GTCGCTCGATGAAGCAGGAACCCACCGAAACGACTCAGATCATGGTTTGA
Upstream 100 bases:
>100_bases GATGACCAAGCTATGTTTATCGCCGATTAATCGCGGCATCCTTCGATATATATCATCTCTATCCGGTATTGGCGATTAAT CCAGCCTACACCAGTCAGCA
Downstream 100 bases:
>100_bases GCGTAGTAGGAATCCCGCGCCTTTAGGCGGGGGAGGATGTTAACTGGTGGCGAAAAGTTGCGCAGCGCGACAAAATGTCG CATACTATGCATACGCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MRLLWSYSERKPPVTKSFECLECGYTENADINGARNILAAGHAALACGEMAALGRSMKQEPTETTQIMV
Sequences:
>Translated_69_residues MRLLWSYSERKPPVTKSFECLECGYTENADINGARNILAAGHAALACGEMAALGRSMKQEPTETTQIMV >Mature_69_residues MRLLWSYSERKPPVTKSFECLECGYTENADINGARNILAAGHAALACGEMAALGRSMKQEPTETTQIMV
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG0675
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transposase 35 family [H]
Homologues:
Organism=Escherichia coli, GI288549314, Length=49, Percent_Identity=73.469387755102, Blast_Score=80, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001959 - InterPro: IPR010095 - InterPro: IPR021027 [H]
Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]
EC number: NA
Molecular weight: Translated: 7563; Mature: 7563
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLWSYSERKPPVTKSFECLECGYTENADINGARNILAAGHAALACGEMAALGRSMKQE CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCC PTETTQIMV CCCCCEECC >Mature Secondary Structure MRLLWSYSERKPPVTKSFECLECGYTENADINGARNILAAGHAALACGEMAALGRSMKQE CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCC PTETTQIMV CCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]