Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919904

Identifier: 238919904

GI number: 238919904

Start: 1939153

End: 1939404

Strand: Direct

Name: 238919904

Synonym: NT01EI_2008

Alternate gene names: NA

Gene position: 1939153-1939404 (Clockwise)

Preceding gene: 238919895

Following gene: 238919905

Centisome position: 50.87

GC content: 51.59

Gene sequence:

>252_bases
ATGGCATACCAAATTCTCACGACCACCGCCGCCAGCATTACCGACCTGAAACGCAATCCAATGGGTACCATTGCTGAAGG
TGACGGCAATGCCGTAGCAATCTTAAACCGGAATGAGCCGGCCTTTTACTGCGTTCCACCGGAACTCTACGCTTACTATC
TGGAGCTGGCTGAAGATGCGGCGCTTAATCGTATCGCCGATGAGCGTCTGGAGGACGCTGAGTTTGTCAGCGTAAATATC
GATGACCTATAA

Upstream 100 bases:

>100_bases
CGGGGTTTTACGGCGCACTGAATAAAAAGCATGCTTAAAAGCACCTTTAAAGGTGTCTATAAAAACGCTATAGTGTATCT
ATCTGACAAGGAGAAGACAT

Downstream 100 bases:

>100_bases
ACTGAGCTTTGAAAAGCGAGCCCTGAAAGAGTGGAAAAAACTGGCACCGCCGATTCAAAGCCAGTTGAAAAAGAAACTGA
TCGAACGCCTGGAAAACCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Stability Protein StbD; Prevent-Host-Death Protein; Antitoxin Of xin-Antitoxin Stability System

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MAYQILTTTAASITDLKRNPMGTIAEGDGNAVAILNRNEPAFYCVPPELYAYYLELAEDAALNRIADERLEDAEFVSVNI
DDL

Sequences:

>Translated_83_residues
MAYQILTTTAASITDLKRNPMGTIAEGDGNAVAILNRNEPAFYCVPPELYAYYLELAEDAALNRIADERLEDAEFVSVNI
DDL
>Mature_82_residues
AYQILTTTAASITDLKRNPMGTIAEGDGNAVAILNRNEPAFYCVPPELYAYYLELAEDAALNRIADERLEDAEFVSVNID
DL

Specific function: Unknown

COG id: COG2161

COG function: function code D; Antitoxin of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9155; Mature: 9024

Theoretical pI: Translated: 3.76; Mature: 3.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYQILTTTAASITDLKRNPMGTIAEGDGNAVAILNRNEPAFYCVPPELYAYYLELAEDA
CCEEEEECCCHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHH
ALNRIADERLEDAEFVSVNIDDL
HHHHHHHHCCCCCEEEEEEECCC
>Mature Secondary Structure 
AYQILTTTAASITDLKRNPMGTIAEGDGNAVAILNRNEPAFYCVPPELYAYYLELAEDA
CEEEEECCCHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHH
ALNRIADERLEDAEFVSVNIDDL
HHHHHHHHCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA