| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919895
Identifier: 238919895
GI number: 238919895
Start: 1931784
End: 1931912
Strand: Direct
Name: 238919895
Synonym: NT01EI_2000
Alternate gene names: NA
Gene position: 1931784-1931912 (Clockwise)
Preceding gene: 238919885
Following gene: 238919904
Centisome position: 50.67
GC content: 49.61
Gene sequence:
>129_bases GTGCCGAAAATGACAGTTTTGTGCCAGGGTGGCATTGGTTTCTGGCAAAAGGTGGCTAACGATCCGGGGCTGTTCACCGC GCATCAGGGAAATATCAATCGAGGACATCGTTATCGGAAGCACTTATAA
Upstream 100 bases:
>100_bases AGGTAAACCAGACATCATCCCGGTAATGGAACAGCGTCTGAGGATCGAGAGAAAACGGGATCGCCTCGTCTTTATCCATA TAAAGTGGAGTGATGACGCC
Downstream 100 bases:
>100_bases ACTGATGCAGCTCAGTATTAAAAACCTTACCGCTCAGGGTAAAATTATCGGGTACCGTCACTACGTAGTAGCACGCTACG TGCTCAGGTGGCGGATATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 41
Protein sequence:
>42_residues MPKMTVLCQGGIGFWQKVANDPGLFTAHQGNINRGHRYRKHL
Sequences:
>Translated_42_residues MPKMTVLCQGGIGFWQKVANDPGLFTAHQGNINRGHRYRKHL >Mature_41_residues PKMTVLCQGGIGFWQKVANDPGLFTAHQGNINRGHRYRKHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4779; Mature: 4647
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKMTVLCQGGIGFWQKVANDPGLFTAHQGNINRGHRYRKHL CCCEEEEECCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure PKMTVLCQGGIGFWQKVANDPGLFTAHQGNINRGHRYRKHL CCEEEEECCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA