Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919903

Identifier: 238919903

GI number: 238919903

Start: 1937864

End: 1938865

Strand: Reverse

Name: 238919903

Synonym: NT01EI_2007

Alternate gene names: NA

Gene position: 1938865-1937864 (Counterclockwise)

Preceding gene: 238919906

Following gene: 238919902

Centisome position: 50.86

GC content: 62.97

Gene sequence:

>1002_bases
ATGGACATCGATGATGCAGATATCGCCGGGAAGACACCGGACGAGCTGGAGGCACTGCTGGCGCAGGCCGGTAGCAATGA
GGAGGACGTGTCCGCGGGCGAGGGCGATCCGGAACCGGCGATCGCACCGGACACGCCAGCGTCCGCAGGGGATGTGCCGC
CTGAGGCTGCATTGGCATCGCCAGCTGGAGAAGAGCCGCAGGACGCTGCGGTCACCGATCCCGCCGCTAAAGTGGTACTG
GGTAAGGATGGCGTACACCATATTCCCTACGATGTACTGCAGGCTGCCAGGGAGCAGGCGCGCCGCAGCGCACAGTCGGC
GCAGTCCGCTGCCGAGGAGAATGCGGCGCTTAAGCGCACGCTGACGCTGCTGCAGCAGCAGGTGAGCCGGGCAGGGATGC
AGCCGGCCACCCTGCCGGAAGAGACGCAGATCAGTACCGAGCAGTTGGATAAGGTGCGGGCGGACTTCCCGGAGCTGGCA
GAGATGTTCGAGCAGGTGGTTAACCAGGTGAACTACCTGAATGCGCGGGCGAAGCCGAGTCCCAGCGAGGATGGTGGCGG
AATCAACCCGGTGCTGGAGGCGATTGCGCGCAATCCCGATCTGGCACAGTGGTTCGATAGTGACATCGATCGGCGCGATT
TTGCCATTACGGTGGATGAGCGTCTGAAAACCGATCCTGCCTGGCAAGACAAAACCCTGGATGCGCGTTTCGCTGAGGCC
GCCCGACGTACCAAGGTCGCGTTTGGCGATCCGGACGTGGCCGTGGGGGCGACCTCAGCAGAATCGCTAAAAAAACAGGC
GGAGGAGAAGCTGGCCGCGGCGGCCGCGACGCCCAGCGTACCCTCTTCGCCATCGGATGTGGGACAGCCGGTAACCCAGT
CACCGCAGTCGGTGCTGGATAAGGCAGCCAATGCCAGTGATGGTGAACTGCTGGCCATGATGGCCGGAATGAGTGAGAGC
CAGATCGAGGCATTGTTGTCACAGGCCGGTGATGCGTTTTAA

Upstream 100 bases:

>100_bases
GCAAAGGGCTCTGTTATCGCAGAGCCCTTTTTCGCATGGGCAGCGACACGCCTTTTTCTGTTTCGGATCTATCCGACAAA
TAGACAGGCAGGAGAGCAAT

Downstream 100 bases:

>100_bases
CCGGGACAGGAAAAATCATGACGACCATTACCAAAGCCCAGGCGAATAAGCTGTTGCAGGTAGCGCTGTTTACCGCCGCC
AACCGCAACCGCTCGTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MDIDDADIAGKTPDELEALLAQAGSNEEDVSAGEGDPEPAIAPDTPASAGDVPPEAALASPAGEEPQDAAVTDPAAKVVL
GKDGVHHIPYDVLQAAREQARRSAQSAQSAAEENAALKRTLTLLQQQVSRAGMQPATLPEETQISTEQLDKVRADFPELA
EMFEQVVNQVNYLNARAKPSPSEDGGGINPVLEAIARNPDLAQWFDSDIDRRDFAITVDERLKTDPAWQDKTLDARFAEA
ARRTKVAFGDPDVAVGATSAESLKKQAEEKLAAAAATPSVPSSPSDVGQPVTQSPQSVLDKAANASDGELLAMMAGMSES
QIEALLSQAGDAF

Sequences:

>Translated_333_residues
MDIDDADIAGKTPDELEALLAQAGSNEEDVSAGEGDPEPAIAPDTPASAGDVPPEAALASPAGEEPQDAAVTDPAAKVVL
GKDGVHHIPYDVLQAAREQARRSAQSAQSAAEENAALKRTLTLLQQQVSRAGMQPATLPEETQISTEQLDKVRADFPELA
EMFEQVVNQVNYLNARAKPSPSEDGGGINPVLEAIARNPDLAQWFDSDIDRRDFAITVDERLKTDPAWQDKTLDARFAEA
ARRTKVAFGDPDVAVGATSAESLKKQAEEKLAAAAATPSVPSSPSDVGQPVTQSPQSVLDKAANASDGELLAMMAGMSES
QIEALLSQAGDAF
>Mature_333_residues
MDIDDADIAGKTPDELEALLAQAGSNEEDVSAGEGDPEPAIAPDTPASAGDVPPEAALASPAGEEPQDAAVTDPAAKVVL
GKDGVHHIPYDVLQAAREQARRSAQSAQSAAEENAALKRTLTLLQQQVSRAGMQPATLPEETQISTEQLDKVRADFPELA
EMFEQVVNQVNYLNARAKPSPSEDGGGINPVLEAIARNPDLAQWFDSDIDRRDFAITVDERLKTDPAWQDKTLDARFAEA
ARRTKVAFGDPDVAVGATSAESLKKQAEEKLAAAAATPSVPSSPSDVGQPVTQSPQSVLDKAANASDGELLAMMAGMSES
QIEALLSQAGDAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34945; Mature: 34945

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIDDADIAGKTPDELEALLAQAGSNEEDVSAGEGDPEPAIAPDTPASAGDVPPEAALAS
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
PAGEEPQDAAVTDPAAKVVLGKDGVHHIPYDVLQAAREQARRSAQSAQSAAEENAALKRT
CCCCCCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLLQQQVSRAGMQPATLPEETQISTEQLDKVRADFPELAEMFEQVVNQVNYLNARAKPS
HHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
PSEDGGGINPVLEAIARNPDLAQWFDSDIDRRDFAITVDERLKTDPAWQDKTLDARFAEA
CCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCHHHHHHHH
ARRTKVAFGDPDVAVGATSAESLKKQAEEKLAAAAATPSVPSSPSDVGQPVTQSPQSVLD
HHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHH
KAANASDGELLAMMAGMSESQIEALLSQAGDAF
HHCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDIDDADIAGKTPDELEALLAQAGSNEEDVSAGEGDPEPAIAPDTPASAGDVPPEAALAS
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
PAGEEPQDAAVTDPAAKVVLGKDGVHHIPYDVLQAAREQARRSAQSAQSAAEENAALKRT
CCCCCCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLLQQQVSRAGMQPATLPEETQISTEQLDKVRADFPELAEMFEQVVNQVNYLNARAKPS
HHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
PSEDGGGINPVLEAIARNPDLAQWFDSDIDRRDFAITVDERLKTDPAWQDKTLDARFAEA
CCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCHHHHHHHH
ARRTKVAFGDPDVAVGATSAESLKKQAEEKLAAAAATPSVPSSPSDVGQPVTQSPQSVLD
HHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHH
KAANASDGELLAMMAGMSESQIEALLSQAGDAF
HHCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA