Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919902

Identifier: 238919902

GI number: 238919902

Start: 1936590

End: 1937846

Strand: Reverse

Name: 238919902

Synonym: NT01EI_2006

Alternate gene names: NA

Gene position: 1937846-1936590 (Counterclockwise)

Preceding gene: 238919903

Following gene: 238919901

Centisome position: 50.83

GC content: 56.25

Gene sequence:

>1257_bases
ATGACGACCATTACCAAAGCCCAGGCGAATAAGCTGTTGCAGGTAGCGCTGTTTACCGCCGCCAACCGCAACCGCTCGTT
TGTCAACGTGCTGACGGAGCAATCCGAAGCACCCAAGCAGGTTGCCTCTGATAAGCAGGGGGTGAATCAGACCAGCTATA
CCGCACCGGTGGTGCGGGTAACTGATTTAACCAAAACCAAGGGGGACTCGGTGGATATGCAGGTGATCCACAAGCTGTCC
AAACGCCCGACCATGGGGGACCAGAAGCTGGAGGGGCGCGGAGAAAACCTGCAGTTTGCCGACTTTGCGCTGAGTATCGA
TCAGGGACGGCACATTGTGGATGCCGGTGGAAAGATGTCGCAGCAGCGCTTTAAGCACGATCTGCGCAGTGCAGCACGTC
GTCTTCTCGGTACCTATTTTAACGATCTGCAGGACCAGTGTGCCGTGGTACATCTGGCGGGTACCCGTGGGGATTTTATG
GCGGACGATATTATCCTGCCGCCCGCCGATCACCCGGAGTTTGCGCGGATCATGGTTAACGAGGTCATGCCGCCAACCTA
CGATCGCCATTTTTTCTCCGGTGATGCGACCTCCTTTGAACTGTTGGATGCGGCGGATCTATTCAGCCTGGCGACAGTGG
ACAATATCTCTCTCTACCTGGACGAAATGGCGCACCCGCTGCAGCCGGTCAGGCTGTCGCGCGATGAGTTGAAGGATGAG
GACCCCTACTTTGTGCTGTACGTGACTCCACGGCAATGGAATGACTGGTATACCTCCACTAACGGCAAGGACTGGCAGGC
GATGATGACCCGGGCGGTACAGCGCTCAAAAGGGTTCGATCACCCGCTGTTCAAGGGGGAGTGCGCCATGTGGCGCAATA
TCCTGGTGCGTAAGTATGGTGGCATGCCGATCCGTTTCTACCAGGGTTCTAGCGTTCAGGTCTCTGCCAATGATGATGCG
GCCTCGGTACAGACTCTGCAGGCCAATACGGCTATTGACCGGGCGATTTTGCTGGGGGGGCAGGCGCTGGCCAGCGCCTG
GGGGATTGGCGACGGCGGCGGATTCTTTGGCTATCACGAAGAGCGCACTGATCATGACAACGGGCGGGAGATCTCTATTC
GCTGGATCAACGGACTGAAGAAAATCCGCTTTAGGCAGAAAAATGGCCGTGTTCAGGATCACGGTGTGATGGTGGTGGAC
TCTGCTGTCAGCGGTGATCAGCCGAATAATCAGGAGATAATGTTTTTTCCAGTTTGA

Upstream 100 bases:

>100_bases
ATGGTGAACTGCTGGCCATGATGGCCGGAATGAGTGAGAGCCAGATCGAGGCATTGTTGTCACAGGCCGGTGATGCGTTT
TAACCGGGACAGGAAAAATC

Downstream 100 bases:

>100_bases
CATCCTCCTCCGCCTTTAGGTGGGGGAGGATATCAAATGCACGTTTCATGGTTTCACCTGCTAAAGAGGAGAATGTGATG
ATGCAAAAGACAGTTAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTTITKAQANKLLQVALFTAANRNRSFVNVLTEQSEAPKQVASDKQGVNQTSYTAPVVRVTDLTKTKGDSVDMQVIHKLS
KRPTMGDQKLEGRGENLQFADFALSIDQGRHIVDAGGKMSQQRFKHDLRSAARRLLGTYFNDLQDQCAVVHLAGTRGDFM
ADDIILPPADHPEFARIMVNEVMPPTYDRHFFSGDATSFELLDAADLFSLATVDNISLYLDEMAHPLQPVRLSRDELKDE
DPYFVLYVTPRQWNDWYTSTNGKDWQAMMTRAVQRSKGFDHPLFKGECAMWRNILVRKYGGMPIRFYQGSSVQVSANDDA
ASVQTLQANTAIDRAILLGGQALASAWGIGDGGGFFGYHEERTDHDNGREISIRWINGLKKIRFRQKNGRVQDHGVMVVD
SAVSGDQPNNQEIMFFPV

Sequences:

>Translated_418_residues
MTTITKAQANKLLQVALFTAANRNRSFVNVLTEQSEAPKQVASDKQGVNQTSYTAPVVRVTDLTKTKGDSVDMQVIHKLS
KRPTMGDQKLEGRGENLQFADFALSIDQGRHIVDAGGKMSQQRFKHDLRSAARRLLGTYFNDLQDQCAVVHLAGTRGDFM
ADDIILPPADHPEFARIMVNEVMPPTYDRHFFSGDATSFELLDAADLFSLATVDNISLYLDEMAHPLQPVRLSRDELKDE
DPYFVLYVTPRQWNDWYTSTNGKDWQAMMTRAVQRSKGFDHPLFKGECAMWRNILVRKYGGMPIRFYQGSSVQVSANDDA
ASVQTLQANTAIDRAILLGGQALASAWGIGDGGGFFGYHEERTDHDNGREISIRWINGLKKIRFRQKNGRVQDHGVMVVD
SAVSGDQPNNQEIMFFPV
>Mature_417_residues
TTITKAQANKLLQVALFTAANRNRSFVNVLTEQSEAPKQVASDKQGVNQTSYTAPVVRVTDLTKTKGDSVDMQVIHKLSK
RPTMGDQKLEGRGENLQFADFALSIDQGRHIVDAGGKMSQQRFKHDLRSAARRLLGTYFNDLQDQCAVVHLAGTRGDFMA
DDIILPPADHPEFARIMVNEVMPPTYDRHFFSGDATSFELLDAADLFSLATVDNISLYLDEMAHPLQPVRLSRDELKDED
PYFVLYVTPRQWNDWYTSTNGKDWQAMMTRAVQRSKGFDHPLFKGECAMWRNILVRKYGGMPIRFYQGSSVQVSANDDAA
SVQTLQANTAIDRAILLGGQALASAWGIGDGGGFFGYHEERTDHDNGREISIRWINGLKKIRFRQKNGRVQDHGVMVVDS
AVSGDQPNNQEIMFFPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46854; Mature: 46723

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTITKAQANKLLQVALFTAANRNRSFVNVLTEQSEAPKQVASDKQGVNQTSYTAPVVRV
CCCCCHHHHHHHHHHEEEHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEE
TDLTKTKGDSVDMQVIHKLSKRPTMGDQKLEGRGENLQFADFALSIDQGRHIVDAGGKMS
EECCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCCCCEEEEEEEECCCCCEEEECCCCHH
QQRFKHDLRSAARRLLGTYFNDLQDQCAVVHLAGTRGDFMADDIILPPADHPEFARIMVN
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHH
EVMPPTYDRHFFSGDATSFELLDAADLFSLATVDNISLYLDEMAHPLQPVRLSRDELKDE
HCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC
DPYFVLYVTPRQWNDWYTSTNGKDWQAMMTRAVQRSKGFDHPLFKGECAMWRNILVRKYG
CCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
GMPIRFYQGSSVQVSANDDAASVQTLQANTAIDRAILLGGQALASAWGIGDGGGFFGYHE
CCEEEEECCCEEEEECCCCCHHEEEEEHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
ERTDHDNGREISIRWINGLKKIRFRQKNGRVQDHGVMVVDSAVSGDQPNNQEIMFFPV
CCCCCCCCCEEEEEECCCHHHHHHHHCCCCEECCCEEEEECCCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
TTITKAQANKLLQVALFTAANRNRSFVNVLTEQSEAPKQVASDKQGVNQTSYTAPVVRV
CCCCHHHHHHHHHHEEEHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEE
TDLTKTKGDSVDMQVIHKLSKRPTMGDQKLEGRGENLQFADFALSIDQGRHIVDAGGKMS
EECCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCCCCEEEEEEEECCCCCEEEECCCCHH
QQRFKHDLRSAARRLLGTYFNDLQDQCAVVHLAGTRGDFMADDIILPPADHPEFARIMVN
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHH
EVMPPTYDRHFFSGDATSFELLDAADLFSLATVDNISLYLDEMAHPLQPVRLSRDELKDE
HCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC
DPYFVLYVTPRQWNDWYTSTNGKDWQAMMTRAVQRSKGFDHPLFKGECAMWRNILVRKYG
CCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
GMPIRFYQGSSVQVSANDDAASVQTLQANTAIDRAILLGGQALASAWGIGDGGGFFGYHE
CCEEEEECCCEEEEECCCCCHHEEEEEHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
ERTDHDNGREISIRWINGLKKIRFRQKNGRVQDHGVMVVDSAVSGDQPNNQEIMFFPV
CCCCCCCCCEEEEEECCCHHHHHHHHCCCCEECCCEEEEECCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA