Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919899

Identifier: 238919899

GI number: 238919899

Start: 1934971

End: 1935552

Strand: Reverse

Name: 238919899

Synonym: NT01EI_2003

Alternate gene names: NA

Gene position: 1935552-1934971 (Counterclockwise)

Preceding gene: 238919900

Following gene: 238919898

Centisome position: 50.77

GC content: 61.0

Gene sequence:

>582_bases
ATGGTTCGGGCCGATATTTTTTTGCCGGCCATACGCCGGGGAATTGACGGGCCGCTGGAGATGATGATGCGCGAGGCGCT
CCTGAGCGCAGCGATCCGTTTTTGCCGGGAGTCGCTGGTAAGCAGGGAAACGCTGCAGTTTGGGGCAGCGCAGGCCGGGC
TGACATTGTCTCTGGCGCCAGCGGACACCGCACTGATATTCAGTCGGCTACTCTCGGTAACCTCACGGCAATCGCCCAAT
ATTGCGGTCGCGCTGTGGCCAGGCGTGGATTTTACCGTAGAGGCGGACCAGCTGCGGTTATTGTGTCCGGTTGCGGCGCT
GCGTGTACGCATGGCGACCGAGCCCGCGCCGGGTGCCACCGAGCTTCCCGATGCGCTGGAAGCCTATCAGGAGGCGCTGG
CAGCGGGTGCATTGATGCAGCTGTATATGATGGCGGGCAAGCCCTGGAGCGATGCTCAGCGCGCCGACTATTACCGGCTC
CGTTTTATCGATGGCTATCGGGAGGCGTTTCGCAGTAGCAGTGAGGTTGCCCCGTATGAGACGGGTTTTCATAATCCAAC
ACGCCGACACGCCTTTTTCTGA

Upstream 100 bases:

>100_bases
CGCAGGAGTTGGGTGTGCAGAAAGGTGCCCAGGAGAAGGCGGATGCGTTCCGTGTCAGAGTTCGCGATGCATACCGGGAA
AAAATAGCGGTACAAGCCTG

Downstream 100 bases:

>100_bases
TGACGACGATTGCTGATGTGATAGGAAGGGTGAATACCCAACTGAAGGATACCCTGTGGGCGCGCTGGCCGTTGGCCGAA
CTGTGCGACTACTTTAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MVRADIFLPAIRRGIDGPLEMMMREALLSAAIRFCRESLVSRETLQFGAAQAGLTLSLAPADTALIFSRLLSVTSRQSPN
IAVALWPGVDFTVEADQLRLLCPVAALRVRMATEPAPGATELPDALEAYQEALAAGALMQLYMMAGKPWSDAQRADYYRL
RFIDGYREAFRSSSEVAPYETGFHNPTRRHAFF

Sequences:

>Translated_193_residues
MVRADIFLPAIRRGIDGPLEMMMREALLSAAIRFCRESLVSRETLQFGAAQAGLTLSLAPADTALIFSRLLSVTSRQSPN
IAVALWPGVDFTVEADQLRLLCPVAALRVRMATEPAPGATELPDALEAYQEALAAGALMQLYMMAGKPWSDAQRADYYRL
RFIDGYREAFRSSSEVAPYETGFHNPTRRHAFF
>Mature_193_residues
MVRADIFLPAIRRGIDGPLEMMMREALLSAAIRFCRESLVSRETLQFGAAQAGLTLSLAPADTALIFSRLLSVTSRQSPN
IAVALWPGVDFTVEADQLRLLCPVAALRVRMATEPAPGATELPDALEAYQEALAAGALMQLYMMAGKPWSDAQRADYYRL
RFIDGYREAFRSSSEVAPYETGFHNPTRRHAFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21359; Mature: 21359

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRADIFLPAIRRGIDGPLEMMMREALLSAAIRFCRESLVSRETLQFGAAQAGLTLSLAP
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEECC
ADTALIFSRLLSVTSRQSPNIAVALWPGVDFTVEADQLRLLCPVAALRVRMATEPAPGAT
CHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCC
ELPDALEAYQEALAAGALMQLYMMAGKPWSDAQRADYYRLRFIDGYREAFRSSSEVAPYE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHEEEHHHHHHHHCCCCCCCCCC
TGFHNPTRRHAFF
CCCCCCCCCCCCC
>Mature Secondary Structure
MVRADIFLPAIRRGIDGPLEMMMREALLSAAIRFCRESLVSRETLQFGAAQAGLTLSLAP
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEECC
ADTALIFSRLLSVTSRQSPNIAVALWPGVDFTVEADQLRLLCPVAALRVRMATEPAPGAT
CHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCC
ELPDALEAYQEALAAGALMQLYMMAGKPWSDAQRADYYRLRFIDGYREAFRSSSEVAPYE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHEEEHHHHHHHHCCCCCCCCCC
TGFHNPTRRHAFF
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA