Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919898

Identifier: 238919898

GI number: 238919898

Start: 1934309

End: 1934941

Strand: Reverse

Name: 238919898

Synonym: NT01EI_2002

Alternate gene names: NA

Gene position: 1934941-1934309 (Counterclockwise)

Preceding gene: 238919899

Following gene: 238919897

Centisome position: 50.76

GC content: 57.03

Gene sequence:

>633_bases
GTGAATACCCAACTGAAGGATACCCTGTGGGCGCGCTGGCCGTTGGCCGAACTGTGCGACTACTTTAATGATGCGATACG
CGCCATTTTACTGGTGCGCCCGGATGCCGGTGCCGTGATGACCACACTGGAGACTGTGCCGGGAACACGGCAATCGTTGC
CTGGGGATGTATTCCGGCTGCTGGATATTGTGCGCGTTCAGAATGGGCGGGCGCTGTTACCGCTACCACGCGAGGTATTG
GATACCCAATATCCGGGCTGGCACGCTATGAGCGGGGTAGTGGAGCGTTATTGTTACAGCGATCAGACCCCGCAGGTTTA
TTACCTGTTCCCCGCTCCGGAAGAGGAGGTGATATTGGATGCGGTGGTATGTCGCAGCCCTGAACCCATCAGTGTGGAGA
CGCTGCAGGATCCCGTTGCGCTTCAGCCGGTACCGCTCGATCCCGTTTATATCAATCCCCTGATGGACTGGATGTTGTTC
CGTGCATTCAGCAAAGACAATGAGGGCGGGGCCAATGTGGCATTGGCCGTCCAGCATTACCAGATGTTTGTGGAGCAGCT
GGGGGTTAAACAGCGCGCCGATGCCACAATCCGCCAGTTACTGCGCGGTAAGTATATGGGAGGAGAGGTGTGA

Upstream 100 bases:

>100_bases
GCAGTAGCAGTGAGGTTGCCCCGTATGAGACGGGTTTTCATAATCCAACACGCCGACACGCCTTTTTCTGATGACGACGA
TTGCTGATGTGATAGGAAGG

Downstream 100 bases:

>100_bases
GTGTTGTGATTTCCGGGGTTTTACTCGATCCGTCCGGTAAAGCGGTATCCGGTGCCCAGATTACATTGACGGCTATTGCC
AATAGCATGCAGGTACTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MNTQLKDTLWARWPLAELCDYFNDAIRAILLVRPDAGAVMTTLETVPGTRQSLPGDVFRLLDIVRVQNGRALLPLPREVL
DTQYPGWHAMSGVVERYCYSDQTPQVYYLFPAPEEEVILDAVVCRSPEPISVETLQDPVALQPVPLDPVYINPLMDWMLF
RAFSKDNEGGANVALAVQHYQMFVEQLGVKQRADATIRQLLRGKYMGGEV

Sequences:

>Translated_210_residues
MNTQLKDTLWARWPLAELCDYFNDAIRAILLVRPDAGAVMTTLETVPGTRQSLPGDVFRLLDIVRVQNGRALLPLPREVL
DTQYPGWHAMSGVVERYCYSDQTPQVYYLFPAPEEEVILDAVVCRSPEPISVETLQDPVALQPVPLDPVYINPLMDWMLF
RAFSKDNEGGANVALAVQHYQMFVEQLGVKQRADATIRQLLRGKYMGGEV
>Mature_210_residues
MNTQLKDTLWARWPLAELCDYFNDAIRAILLVRPDAGAVMTTLETVPGTRQSLPGDVFRLLDIVRVQNGRALLPLPREVL
DTQYPGWHAMSGVVERYCYSDQTPQVYYLFPAPEEEVILDAVVCRSPEPISVETLQDPVALQPVPLDPVYINPLMDWMLF
RAFSKDNEGGANVALAVQHYQMFVEQLGVKQRADATIRQLLRGKYMGGEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23707; Mature: 23707

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQLKDTLWARWPLAELCDYFNDAIRAILLVRPDAGAVMTTLETVPGTRQSLPGDVFRL
CCCCHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCCCHHCCCHHHHHH
LDIVRVQNGRALLPLPREVLDTQYPGWHAMSGVVERYCYSDQTPQVYYLFPAPEEEVILD
HHHHHHCCCCEECCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH
AVVCRSPEPISVETLQDPVALQPVPLDPVYINPLMDWMLFRAFSKDNEGGANVALAVQHY
HHHHCCCCCCCHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QMFVEQLGVKQRADATIRQLLRGKYMGGEV
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNTQLKDTLWARWPLAELCDYFNDAIRAILLVRPDAGAVMTTLETVPGTRQSLPGDVFRL
CCCCHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCCCHHCCCHHHHHH
LDIVRVQNGRALLPLPREVLDTQYPGWHAMSGVVERYCYSDQTPQVYYLFPAPEEEVILD
HHHHHHCCCCEECCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH
AVVCRSPEPISVETLQDPVALQPVPLDPVYINPLMDWMLFRAFSKDNEGGANVALAVQHY
HHHHCCCCCCCHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QMFVEQLGVKQRADATIRQLLRGKYMGGEV
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA