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The map label for this gene is yiiS [H]

Identifier: 238919865

GI number: 238919865

Start: 1897049

End: 1897345

Strand: Direct

Name: yiiS [H]

Synonym: NT01EI_1969

Alternate gene names: 238919865

Gene position: 1897049-1897345 (Clockwise)

Preceding gene: 238919864

Following gene: 238919866

Centisome position: 49.76

GC content: 45.12

Gene sequence:

>297_bases
ATGAAAGAGGTCGTCGATAAATGCAGTAACAAAGGCTGTGCCATCGATATTGGATCTGTGCTCGATAACGATAATTGCAC
CACCATCATTACGCAAGCCTACCCCAGTCGTGATGAGGCCGAGAAGCAGCTGGCAAAGCTAACCGCTAAATCCCAGCGCG
TTGCGCAGCAAGAGTACCCTTGTATAATTACCCACGACATCTGTGAAAAAGAAGGGGAGTTTATTCTTAACGTCCACTTT
AATTTTTCATGTCAGGCTGAAACCGTTATTTTTGAACTTTCACTACGCCACGCATAA

Upstream 100 bases:

>100_bases
ACAATCTAAAAAAATGGTCATATATATTATAATTAATCGTTTTTATTAATTATTAATTTGTTTTACTCTAGAAACAGTTG
ATAATCATGAGGGCAATGTG

Downstream 100 bases:

>100_bases
ACAGTAGGATATTGTACTATGGTTAGAGATAAGTTTATTTTAAAAAGTTTTTCAATAATTAATCTCTGGATTGCCAACCA
TGTCCACCTTGGAATTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MKEVVDKCSNKGCAIDIGSVLDNDNCTTIITQAYPSRDEAEKQLAKLTAKSQRVAQQEYPCIITHDICEKEGEFILNVHF
NFSCQAETVIFELSLRHA

Sequences:

>Translated_98_residues
MKEVVDKCSNKGCAIDIGSVLDNDNCTTIITQAYPSRDEAEKQLAKLTAKSQRVAQQEYPCIITHDICEKEGEFILNVHF
NFSCQAETVIFELSLRHA
>Mature_98_residues
MKEVVDKCSNKGCAIDIGSVLDNDNCTTIITQAYPSRDEAEKQLAKLTAKSQRVAQQEYPCIITHDICEKEGEFILNVHF
NFSCQAETVIFELSLRHA

Specific function: Unknown

COG id: COG3691

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0381 family [H]

Homologues:

Organism=Escherichia coli, GI1790357, Length=97, Percent_Identity=48.4536082474227, Blast_Score=100, Evalue=2e-23,
Organism=Escherichia coli, GI87082087, Length=84, Percent_Identity=39.2857142857143, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005272 [H]

Pfam domain/function: PF04175 DUF406 [H]

EC number: NA

Molecular weight: Translated: 11008; Mature: 11008

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVVDKCSNKGCAIDIGSVLDNDNCTTIITQAYPSRDEAEKQLAKLTAKSQRVAQQEYP
CCHHHHHHCCCCCEEEECCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
CIITHDICEKEGEFILNVHFNFSCQAETVIFELSLRHA
EEEEHHHCCCCCCEEEEEEECCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MKEVVDKCSNKGCAIDIGSVLDNDNCTTIITQAYPSRDEAEKQLAKLTAKSQRVAQQEYP
CCHHHHHHCCCCCEEEECCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
CIITHDICEKEGEFILNVHFNFSCQAETVIFELSLRHA
EEEEHHHCCCCCCEEEEEEECCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]