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The map label for this gene is rstA [H]

Identifier: 238919847

GI number: 238919847

Start: 1881257

End: 1881979

Strand: Reverse

Name: rstA [H]

Synonym: NT01EI_1951

Alternate gene names: 238919847

Gene position: 1881979-1881257 (Counterclockwise)

Preceding gene: 238919848

Following gene: 238919846

Centisome position: 49.37

GC content: 58.64

Gene sequence:

>723_bases
ATGAGCAGAATTGTATTTGTTGAGGATGATCCCGACGTAGGCCAGCTGATTGCCGCCTATCTGGGTAAACATGACATTGA
TGTCACGCTGGAGCCGCGCGGCGATACTGCTTTTGACACCATCATTCGGCTAAAGCCGGATCTGGTGCTGCTGGATATCA
TGCTGCCGGGTAAGGATGGCATGAGTCTATGCCGGGACTTGCGGCCAGCCTACGCTGGGCCCATCGTACTGCTGACTTCG
CTCGACAGCGACATGAACCATATCCTGTCGCTGGAGATGGGCGCCAGCGACTATATTCTGAAAACGACGCCGCCGGCGGT
GCTGCTGGCGCGTTTGCGCCTGCACCTACGCCAACATGCGGCACCACAGCCAGAAAGCACGCGCTCCACATCAGCAACCT
CGGCCAGACTTAACCCACTGCAGCTCGGGCAGCTCTGTATCGATCCGGTCAACCGCGAGGTGCATCTCGCCAGCGCGCAG
GTGCACCTCTCTACCTCCGATTTTGACCTGCTGTGGGAGCTGGCGACCCACGCTGGTACCATTATGGATCGCGACGCCCT
GCTGCAGAATCTGCGCGGCGTCAGCTATGACGGTCTGGATCGCAGTATTGATGTGGCTATTTCCCGCCTGCGCCGCAAGC
TGCACGATACCGGGCCAGAGCCCGTGCGCATCAAAACCGTACGCAATAAGGGATACCTGTTTGCACCTAACGCCTGGGAA
TAG

Upstream 100 bases:

>100_bases
TGTCAATGCCATTGACTTCCTGTTGAATAGTCGTTTCATTACCGGTCGTACCATCGGGGTAGACGGTGGTCGTCCCCTGC
GTTAACCAGGTGTAGAGACG

Downstream 100 bases:

>100_bases
TACCGATGCGCAAACTGTTCATTCAGTTCTACCTGCTGCTGTTTGTCTGCTTCCTGGTTATGGCCATGCTGGTCGGTCTG
GTTTATAAGGTCACCGCCGA

Product: DNA-binding transcriptional regulator RstA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSRIVFVEDDPDVGQLIAAYLGKHDIDVTLEPRGDTAFDTIIRLKPDLVLLDIMLPGKDGMSLCRDLRPAYAGPIVLLTS
LDSDMNHILSLEMGASDYILKTTPPAVLLARLRLHLRQHAAPQPESTRSTSATSARLNPLQLGQLCIDPVNREVHLASAQ
VHLSTSDFDLLWELATHAGTIMDRDALLQNLRGVSYDGLDRSIDVAISRLRRKLHDTGPEPVRIKTVRNKGYLFAPNAWE

Sequences:

>Translated_240_residues
MSRIVFVEDDPDVGQLIAAYLGKHDIDVTLEPRGDTAFDTIIRLKPDLVLLDIMLPGKDGMSLCRDLRPAYAGPIVLLTS
LDSDMNHILSLEMGASDYILKTTPPAVLLARLRLHLRQHAAPQPESTRSTSATSARLNPLQLGQLCIDPVNREVHLASAQ
VHLSTSDFDLLWELATHAGTIMDRDALLQNLRGVSYDGLDRSIDVAISRLRRKLHDTGPEPVRIKTVRNKGYLFAPNAWE
>Mature_239_residues
SRIVFVEDDPDVGQLIAAYLGKHDIDVTLEPRGDTAFDTIIRLKPDLVLLDIMLPGKDGMSLCRDLRPAYAGPIVLLTSL
DSDMNHILSLEMGASDYILKTTPPAVLLARLRLHLRQHAAPQPESTRSTSATSARLNPLQLGQLCIDPVNREVHLASAQV
HLSTSDFDLLWELATHAGTIMDRDALLQNLRGVSYDGLDRSIDVAISRLRRKLHDTGPEPVRIKTVRNKGYLFAPNAWE

Specific function: Member of the two-component regulatory system rstB/rstA [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI145693140, Length=243, Percent_Identity=73.2510288065844, Blast_Score=329, Evalue=1e-91,
Organism=Escherichia coli, GI1789809, Length=237, Percent_Identity=33.7552742616034, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1788394, Length=236, Percent_Identity=34.3220338983051, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI87082012, Length=234, Percent_Identity=32.9059829059829, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1786784, Length=233, Percent_Identity=33.4763948497854, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI2367329, Length=236, Percent_Identity=31.7796610169492, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1786599, Length=236, Percent_Identity=28.3898305084746, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1790863, Length=235, Percent_Identity=29.3617021276596, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786911, Length=234, Percent_Identity=28.2051282051282, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1790860, Length=233, Percent_Identity=27.0386266094421, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787229, Length=217, Percent_Identity=28.110599078341, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1789402, Length=231, Percent_Identity=29.004329004329, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787375, Length=190, Percent_Identity=28.4210526315789, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790552, Length=238, Percent_Identity=28.9915966386555, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26600; Mature: 26469

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIVFVEDDPDVGQLIAAYLGKHDIDVTLEPRGDTAFDTIIRLKPDLVLLDIMLPGKDG
CCEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEECCCCH
MSLCRDLRPAYAGPIVLLTSLDSDMNHILSLEMGASDYILKTTPPAVLLARLRLHLRQHA
HHHHHHCCHHHCCCEEEEEECCCCHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHC
APQPESTRSTSATSARLNPLQLGQLCIDPVNREVHLASAQVHLSTSDFDLLWELATHAGT
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHCCH
IMDRDALLQNLRGVSYDGLDRSIDVAISRLRRKLHDTGPEPVRIKTVRNKGYLFAPNAWE
HCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCCCCC
>Mature Secondary Structure 
SRIVFVEDDPDVGQLIAAYLGKHDIDVTLEPRGDTAFDTIIRLKPDLVLLDIMLPGKDG
CEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEECCCCH
MSLCRDLRPAYAGPIVLLTSLDSDMNHILSLEMGASDYILKTTPPAVLLARLRLHLRQHA
HHHHHHCCHHHCCCEEEEEECCCCHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHC
APQPESTRSTSATSARLNPLQLGQLCIDPVNREVHLASAQVHLSTSDFDLLWELATHAGT
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHCCH
IMDRDALLQNLRGVSYDGLDRSIDVAISRLRRKLHDTGPEPVRIKTVRNKGYLFAPNAWE
HCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1495392 [H]