| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919793
Identifier: 238919793
GI number: 238919793
Start: 1826323
End: 1827261
Strand: Reverse
Name: 238919793
Synonym: NT01EI_1897
Alternate gene names: NA
Gene position: 1827261-1826323 (Counterclockwise)
Preceding gene: 238919794
Following gene: 238919792
Centisome position: 47.93
GC content: 38.02
Gene sequence:
>939_bases ATGAGCACCAACGCAGCATTTTCCGGCGTTAGTTTAGGGGTCGTTTTTTGCATGATTAGTGCGGGATTCGATGTCTATGT AGCCAATGTTATTCAAGAGGTCAATCCGGCAATTTTCATTATCTACTGTTTTATTCTGTCAACCCTGGTTTTCAGCATCA TCTCCAGCGTAAAAAAAGGATCGCGGTATTACTTCATTAAAGCGAAGGCGAATTTTGGCAACCTATTTTTAGTAAATTCC GCCGTTCTATTAAACTGGGGGGGGCTGATACTATCATTGAAATACCTTGAGCCAGCAGTCGTGGGCATTGCATCGGTTGC TTGTGGTCCAGCTCTGACACTCATCATTTCACGTTATATTATTAAAGACACATCCCACCCTACAAAATATGAAGGATATG CAGCCTGGGTGATATTGACAAGTGTCGTTGTTATGCTGGTTAACTCCTATGTTGGGAAAAGTGGCGTTACAGATACAACG ACAACAGAAAGAATCATTGGTATATCCTGTGTCGTCCTTAGTGCAATAGGAACAGTATTGTATACTTTTTTTTCTAAAAG ACTAAGCACGGGGGACTGGAAGACCTATGAAATATTAGGTGTGCGTAACATATTAATGTTACTGGTCACGCTATTTTATA TGTTCTCCTATGAGATATCTTTTTTATTAAATAAAGAAATGCTGCTAATTATCCTGAGCCTTTCTATTATTGGGCACATA CTACCTGTGTTTCTCATCCAAAGCAGCATTGCAACATTGGACCCAATACATGTATCATTAATCCTACTGTTGCTGCCTAT ATTTACTTTACTCTTTCAGTTTTTTGATCCACGTATCCATATATCATCTGAAACTTTCATTACAGTTATTATGATAACGT TTCTACTCATCATTTTAAGCATCGTAAAACTACAAAAAATCGATAAGGATGAAAGATGA
Upstream 100 bases:
>100_bases TGATGATAATAAAGTAACCATTATCGATAACTAAGAATAATAGCACCATCATGGACATTATACTGAAATCGCATGGATAC TTTTATCAAAGGATAATCCA
Downstream 100 bases:
>100_bases AAAAAATCGCAATAGTTGATGGGTTTTCATCTGGAAAATTCATAGCCAAAGAGTTACACAATATGCAATGCAAGCTCATA CATATATCATCCAGTGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSTNAAFSGVSLGVVFCMISAGFDVYVANVIQEVNPAIFIIYCFILSTLVFSIISSVKKGSRYYFIKAKANFGNLFLVNS AVLLNWGGLILSLKYLEPAVVGIASVACGPALTLIISRYIIKDTSHPTKYEGYAAWVILTSVVVMLVNSYVGKSGVTDTT TTERIIGISCVVLSAIGTVLYTFFSKRLSTGDWKTYEILGVRNILMLLVTLFYMFSYEISFLLNKEMLLIILSLSIIGHI LPVFLIQSSIATLDPIHVSLILLLLPIFTLLFQFFDPRIHISSETFITVIMITFLLIILSIVKLQKIDKDER
Sequences:
>Translated_312_residues MSTNAAFSGVSLGVVFCMISAGFDVYVANVIQEVNPAIFIIYCFILSTLVFSIISSVKKGSRYYFIKAKANFGNLFLVNS AVLLNWGGLILSLKYLEPAVVGIASVACGPALTLIISRYIIKDTSHPTKYEGYAAWVILTSVVVMLVNSYVGKSGVTDTT TTERIIGISCVVLSAIGTVLYTFFSKRLSTGDWKTYEILGVRNILMLLVTLFYMFSYEISFLLNKEMLLIILSLSIIGHI LPVFLIQSSIATLDPIHVSLILLLLPIFTLLFQFFDPRIHISSETFITVIMITFLLIILSIVKLQKIDKDER >Mature_311_residues STNAAFSGVSLGVVFCMISAGFDVYVANVIQEVNPAIFIIYCFILSTLVFSIISSVKKGSRYYFIKAKANFGNLFLVNSA VLLNWGGLILSLKYLEPAVVGIASVACGPALTLIISRYIIKDTSHPTKYEGYAAWVILTSVVVMLVNSYVGKSGVTDTTT TERIIGISCVVLSAIGTVLYTFFSKRLSTGDWKTYEILGVRNILMLLVTLFYMFSYEISFLLNKEMLLIILSLSIIGHIL PVFLIQSSIATLDPIHVSLILLLLPIFTLLFQFFDPRIHISSETFITVIMITFLLIILSIVKLQKIDKDER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34592; Mature: 34461
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNAAFSGVSLGVVFCMISAGFDVYVANVIQEVNPAIFIIYCFILSTLVFSIISSVKKG CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC SRYYFIKAKANFGNLFLVNSAVLLNWGGLILSLKYLEPAVVGIASVACGPALTLIISRYI CEEEEEEEECCCCCEEEECCHHHEECCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKDTSHPTKYEGYAAWVILTSVVVMLVNSYVGKSGVTDTTTTERIIGISCVVLSAIGTVL HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YTFFSKRLSTGDWKTYEILGVRNILMLLVTLFYMFSYEISFLLNKEMLLIILSLSIIGHI HHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH LPVFLIQSSIATLDPIHVSLILLLLPIFTLLFQFFDPRIHISSETFITVIMITFLLIILS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHH IVKLQKIDKDER HHHHHHCCCCCC >Mature Secondary Structure STNAAFSGVSLGVVFCMISAGFDVYVANVIQEVNPAIFIIYCFILSTLVFSIISSVKKG CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC SRYYFIKAKANFGNLFLVNSAVLLNWGGLILSLKYLEPAVVGIASVACGPALTLIISRYI CEEEEEEEECCCCCEEEECCHHHEECCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKDTSHPTKYEGYAAWVILTSVVVMLVNSYVGKSGVTDTTTTERIIGISCVVLSAIGTVL HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YTFFSKRLSTGDWKTYEILGVRNILMLLVTLFYMFSYEISFLLNKEMLLIILSLSIIGHI HHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH LPVFLIQSSIATLDPIHVSLILLLLPIFTLLFQFFDPRIHISSETFITVIMITFLLIILS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHH IVKLQKIDKDER HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA