| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238919773
Identifier: 238919773
GI number: 238919773
Start: 1810509
End: 1810751
Strand: Reverse
Name: 238919773
Synonym: NT01EI_1877
Alternate gene names: NA
Gene position: 1810751-1810509 (Counterclockwise)
Preceding gene: 238919775
Following gene: 238919772
Centisome position: 47.5
GC content: 55.14
Gene sequence:
>243_bases ATGAAACGGATCATTAAAGGCGATACAAACTTCTCTCACCTTGTTGTTGCCCATGCCGCTATCGACCAGCATGCAAACGC CTTCGGCCGCACCCGTCAAGGATGGCCTTGTATCTACCACCTGAAATACCGGGATAAACTCATTGCCGTAGAGGTCGTCA CCCGACGGCAATCCTATGTCGCGACCGTCATGGTCGGCGCCCGCAATCTAACCAAGCTATGCGGCATGCCAACCGCCGCC TGA
Upstream 100 bases:
>100_bases TTCTGACTGAAACGTGTCGAAGTATAGGGAATGGTGCTATAACAGAAAGGTCAGCCTACGCTGAACAGAGCAAATTGATG GATTTATGTAGGGAGCCTGT
Downstream 100 bases:
>100_bases TAACCAGGGGCACACAGACCGGTGTGCCCTCCCCGAAGACCTTCATCTTACACCCTCAGTATCACGACGTGCTGCCAGTT TGAAAGCTACGCATGGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MKRIIKGDTNFSHLVVAHAAIDQHANAFGRTRQGWPCIYHLKYRDKLIAVEVVTRRQSYVATVMVGARNLTKLCGMPTAA
Sequences:
>Translated_80_residues MKRIIKGDTNFSHLVVAHAAIDQHANAFGRTRQGWPCIYHLKYRDKLIAVEVVTRRQSYVATVMVGARNLTKLCGMPTAA >Mature_80_residues MKRIIKGDTNFSHLVVAHAAIDQHANAFGRTRQGWPCIYHLKYRDKLIAVEVVTRRQSYVATVMVGARNLTKLCGMPTAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8968; Mature: 8968
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIIKGDTNFSHLVVAHAAIDQHANAFGRTRQGWPCIYHLKYRDKLIAVEVVTRRQSYV CCCEECCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEECCCCHHE ATVMVGARNLTKLCGMPTAA EEEEECCCHHHHHCCCCCCC >Mature Secondary Structure MKRIIKGDTNFSHLVVAHAAIDQHANAFGRTRQGWPCIYHLKYRDKLIAVEVVTRRQSYV CCCEECCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEECCCCHHE ATVMVGARNLTKLCGMPTAA EEEEECCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA