| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919682
Identifier: 238919682
GI number: 238919682
Start: 1727458
End: 1727658
Strand: Reverse
Name: 238919682
Synonym: NT01EI_1783
Alternate gene names: NA
Gene position: 1727658-1727458 (Counterclockwise)
Preceding gene: 238919686
Following gene: 238919680
Centisome position: 45.32
GC content: 53.73
Gene sequence:
>201_bases ATGGCAGAAGCGTTAATCGGATTTGTTCTGCTGGTCAGCCCCTGTGGCCACGATGCCTGTGATGCCTTACCGGTCACAGA GGATATTTACCCGACCCGTACCGAGTGCCAGCAAATGATAAATCGCCTGCACCAGCGTCGCCCTGGCGTAGTGTTATTGT GCAGTGAAGTCTATCGCGACGAAAACGCAAAACCGCGCTAA
Upstream 100 bases:
>100_bases ACGCCCAGCCAGGTGCGACACACTGCGCAAGTGACGGCTCCACAGGTGTTCACGGCATGAGGTCTCCCCCCACATAACCC CTGAGGAATGGGATAGATAG
Downstream 100 bases:
>100_bases GGGCACGGCGATGGGCTGGCGGTGAATCGGGGTGTACTGTCGGCTGCCGCCCGCCGAGGGCGATTGGCACACCCCATATC TAGCGACGAACCTATCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MAEALIGFVLLVSPCGHDACDALPVTEDIYPTRTECQQMINRLHQRRPGVVLLCSEVYRDENAKPR
Sequences:
>Translated_66_residues MAEALIGFVLLVSPCGHDACDALPVTEDIYPTRTECQQMINRLHQRRPGVVLLCSEVYRDENAKPR >Mature_65_residues AEALIGFVLLVSPCGHDACDALPVTEDIYPTRTECQQMINRLHQRRPGVVLLCSEVYRDENAKPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7441; Mature: 7309
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEALIGFVLLVSPCGHDACDALPVTEDIYPTRTECQQMINRLHQRRPGVVLLCSEVYRD CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCC ENAKPR CCCCCC >Mature Secondary Structure AEALIGFVLLVSPCGHDACDALPVTEDIYPTRTECQQMINRLHQRRPGVVLLCSEVYRD CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCC ENAKPR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA