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The map label for this gene is ygbA [H]

Identifier: 238919686

GI number: 238919686

Start: 1728912

End: 1729262

Strand: Reverse

Name: ygbA [H]

Synonym: NT01EI_1787

Alternate gene names: 238919686

Gene position: 1729262-1728912 (Counterclockwise)

Preceding gene: 238919690

Following gene: 238919682

Centisome position: 45.36

GC content: 56.7

Gene sequence:

>351_bases
ATGAGAAAACGGATCCTACGCGAGCAGTTGACGATCCAGTGCATGATACGGCTATATCAGTCTGCAGCACCCAATGCGAT
ACACACTGACGCGACCTATTTCGAGCAGCTGTACCACTATGCCTGCCAGCGCTTGGCACGTTGCCCGTTCGGTGAGGAAA
AACCCGCATGCAAACAGTGTCCAATCCACTGCTATCAACCGGCCAAACGAGAGGCGATGAAAGCGGTCATGCGCTGGGCC
GGACCGCGCATGCTGTGGCATCACCCTATTCTGGCCCTGCGCCATCTATTAGATGATCGACGGCCAGTACCACCGCTGCC
GGAAAAATACCGCCGCCGGGAACGCAGCTAA

Upstream 100 bases:

>100_bases
TCAGATCCACCAATCGCGGGAAAGCTCAATTTATTCAACAACACCTTTATTCAGCGCTATTTTTGCTAAGATAGGCACAT
GGTTACCGGGAGAGAATACG

Downstream 100 bases:

>100_bases
AGCCCGGAGCGGACGCGGTGATAGCCAGCCGACGTTTAGCGCACTACCAAGACGCTGGTGGTCGCGTAGCGCACGATCTT
GGTGGCGTTAGAGCCCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MRKRILREQLTIQCMIRLYQSAAPNAIHTDATYFEQLYHYACQRLARCPFGEEKPACKQCPIHCYQPAKREAMKAVMRWA
GPRMLWHHPILALRHLLDDRRPVPPLPEKYRRRERS

Sequences:

>Translated_116_residues
MRKRILREQLTIQCMIRLYQSAAPNAIHTDATYFEQLYHYACQRLARCPFGEEKPACKQCPIHCYQPAKREAMKAVMRWA
GPRMLWHHPILALRHLLDDRRPVPPLPEKYRRRERS
>Mature_116_residues
MRKRILREQLTIQCMIRLYQSAAPNAIHTDATYFEQLYHYACQRLARCPFGEEKPACKQCPIHCYQPAKREAMKAVMRWA
GPRMLWHHPILALRHLLDDRRPVPPLPEKYRRRERS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789088, Length=109, Percent_Identity=67.8899082568807, Blast_Score=154, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020483
- ProDom:   PD075772 [H]

Pfam domain/function: PF11756 YgbA_NO [H]

EC number: NA

Molecular weight: Translated: 13925; Mature: 13925

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRILREQLTIQCMIRLYQSAAPNAIHTDATYFEQLYHYACQRLARCPFGEEKPACKQC
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHC
PIHCYQPAKREAMKAVMRWAGPRMLWHHPILALRHLLDDRRPVPPLPEKYRRRERS
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MRKRILREQLTIQCMIRLYQSAAPNAIHTDATYFEQLYHYACQRLARCPFGEEKPACKQC
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHC
PIHCYQPAKREAMKAVMRWAGPRMLWHHPILALRHLLDDRRPVPPLPEKYRRRERS
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938937; 9278503 [H]