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The map label for this gene is oppF2 [H]

Identifier: 238919640

GI number: 238919640

Start: 1693999

End: 1694610

Strand: Reverse

Name: oppF2 [H]

Synonym: NT01EI_1741

Alternate gene names: 238919640

Gene position: 1694610-1693999 (Counterclockwise)

Preceding gene: 238919641

Following gene: 238919636

Centisome position: 44.45

GC content: 63.4

Gene sequence:

>612_bases
ATGCTGATCTGCCGGGATTTAACGGTCCACCAGGGGGGAAAATATCTGTGGCAAGGTCTGAACCTCAACCTACGCCCGGG
AGAGCGCCTGGGGATCAGCGCGCCGAGCGGCTTTGGCAAAACCACCCTGGGACGGGTATTGGCCGGATGGCAAAACGCGG
CCAGCGGTGTGCTGCAGGTTGACGGGGCACCGCTGCCGCTACATGGCTACTGCCCGGTACAGCTGGTTCCCCAGCATCCG
GAGCTGACCTTTAACCCCTGGCGCAGCACCGGCGCCGCCCTGCAAGATGCCTGGCGTCCCGATGCGATAACGCTGGAGCA
TCTGCATATCCAACCCCATTGGCTACAGCGAAAGCCGGGCCAGCTGTCCGGCGGCGAGCTGGCCCGTATCGCCCTGCTGC
GGGCGCTGGACCCACGCACCCGCTACCTGATAGCCGATGAGATCACCGCGCAGCTGGATCCGGCGATCCAGCGCGATATC
TGGCGCTATCTGCTACAGGAGAGCCAGAGCCGTCCGCTGGGCATGATCATCTTCAGCCATCAGCAGGCGTTGCTGGATCA
GATCTGTACCCGGATCATCACACTGCCACAGCGAGCGACAGCAACGGCCTAA

Upstream 100 bases:

>100_bases
GCGCGCAGCTGCAGCGCGGCGAAATCAGCGAGCGACTCATGCGCCAGTGGCAGGCGCTGCCGGAGCGCGGCACCCTATTT
TCTGATCTGGAGCGTGCCCC

Downstream 100 bases:

>100_bases
CCCCATCGATAGCGCCCTGACGATGACACAACGCCCGCACTGTGCGGGCGTTGTGTTTTCTGGCATTCGCACGCTTAACC
CGGCGTTACAGTAGGCTGTA

Product: hypothetical protein

Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLICRDLTVHQGGKYLWQGLNLNLRPGERLGISAPSGFGKTTLGRVLAGWQNAASGVLQVDGAPLPLHGYCPVQLVPQHP
ELTFNPWRSTGAALQDAWRPDAITLEHLHIQPHWLQRKPGQLSGGELARIALLRALDPRTRYLIADEITAQLDPAIQRDI
WRYLLQESQSRPLGMIIFSHQQALLDQICTRIITLPQRATATA

Sequences:

>Translated_203_residues
MLICRDLTVHQGGKYLWQGLNLNLRPGERLGISAPSGFGKTTLGRVLAGWQNAASGVLQVDGAPLPLHGYCPVQLVPQHP
ELTFNPWRSTGAALQDAWRPDAITLEHLHIQPHWLQRKPGQLSGGELARIALLRALDPRTRYLIADEITAQLDPAIQRDI
WRYLLQESQSRPLGMIIFSHQQALLDQICTRIITLPQRATATA
>Mature_203_residues
MLICRDLTVHQGGKYLWQGLNLNLRPGERLGISAPSGFGKTTLGRVLAGWQNAASGVLQVDGAPLPLHGYCPVQLVPQHP
ELTFNPWRSTGAALQDAWRPDAITLEHLHIQPHWLQRKPGQLSGGELARIALLRALDPRTRYLIADEITAQLDPAIQRDI
WRYLLQESQSRPLGMIIFSHQQALLDQICTRIITLPQRATATA

Specific function: Part of a transport system that may be involved in oligopeptide uptake. Probably responsible for energy coupling to the transport system. Important for S.aureus growth and survival during the infection process [H]

COG id: COG1124

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787029, Length=214, Percent_Identity=26.1682242990654, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789891, Length=199, Percent_Identity=26.6331658291457, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787500, Length=225, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787758, Length=190, Percent_Identity=30, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1788506, Length=206, Percent_Identity=27.6699029126214, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788761, Length=201, Percent_Identity=28.3582089552239, Blast_Score=71, Evalue=4e-14,
Organism=Escherichia coli, GI1789672, Length=200, Percent_Identity=25, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1786253, Length=187, Percent_Identity=28.3422459893048, Blast_Score=70, Evalue=7e-14,
Organism=Escherichia coli, GI1789962, Length=196, Percent_Identity=25.5102040816327, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787547, Length=194, Percent_Identity=25.2577319587629, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI145693107, Length=197, Percent_Identity=26.9035532994924, Blast_Score=67, Evalue=6e-13,
Organism=Escherichia coli, GI1786319, Length=197, Percent_Identity=26.3959390862944, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 22592; Mature: 22592

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLICRDLTVHQGGKYLWQGLNLNLRPGERLGISAPSGFGKTTLGRVLAGWQNAASGVLQV
CEEECCCCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
DGAPLPLHGYCPVQLVPQHPELTFNPWRSTGAALQDAWRPDAITLEHLHIQPHWLQRKPG
CCCCCCCCCCCCEEEECCCCCCEECCCCCCCHHHHHCCCCCCEEEEEEECCCHHHCCCCC
QLSGGELARIALLRALDPRTRYLIADEITAQLDPAIQRDIWRYLLQESQSRPLGMIIFSH
CCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECC
QQALLDQICTRIITLPQRATATA
HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLICRDLTVHQGGKYLWQGLNLNLRPGERLGISAPSGFGKTTLGRVLAGWQNAASGVLQV
CEEECCCCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
DGAPLPLHGYCPVQLVPQHPELTFNPWRSTGAALQDAWRPDAITLEHLHIQPHWLQRKPG
CCCCCCCCCCCCEEEECCCCCCEECCCCCCCHHHHHCCCCCCEEEEEEECCCHHHCCCCC
QLSGGELARIALLRALDPRTRYLIADEITAQLDPAIQRDIWRYLLQESQSRPLGMIIFSH
CCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECC
QQALLDQICTRIITLPQRATATA
HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamine [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA