Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is yfeE [H]

Identifier: 238919634

GI number: 238919634

Start: 1689586

End: 1690131

Strand: Direct

Name: yfeE [H]

Synonym: NT01EI_1735

Alternate gene names: 238919634

Gene position: 1689586-1690131 (Clockwise)

Preceding gene: 238919630

Following gene: 238919637

Centisome position: 44.32

GC content: 53.11

Gene sequence:

>546_bases
ATGACCTATCAACAGGCCGGCTGGGTGGCGATAGCCAAGCGTCTTTTAGGTTGGATAGTGTTCATTCCCGCGTTGCTGTC
GACGCTGATTTCGCTGCTGGGCTTTTTATACCAGCACAGTGAAAAGCAGCAGGGCATCAATGCGGTAATGCTGGATTTTA
TGCATGTCATGATTGACATGGTGCGTTTCAATATGACGTTTCTGGATTTTTTCTGGCAGCACTCGCCGTTGCCGCGCGGG
GACGCAGGGCTGAGCGGCGCCAATTTTTTGTTTTTAGTGATTTACTGGATGATTTTTGTCGGTATGGCGCTGTGCGCTTC
CGGTGCGCGTATGAGCCGTCAGGTCCGTCATATCCGCGAGGGGCTTGAGGATCACCTGATCCTCGAACGGGCCAAAGGGG
AAACGGGGCAAACCCGTGCTCAGCTGGAGCAGCGCATTATTATCCCGCGTCATGCCATTCTGCTGCAGATTTTTCCGCTC
TACCTGCTGCCACTGATTATTCTGGTGCTAGGTTACCTGGCGCTGCATTTGCTGGGGATGGTATAG

Upstream 100 bases:

>100_bases
GGTAATCTCCATACTGCGCAGAGGATGAATTGCGTCGCCGGATACGGGCACGTAGACTGCGCATGTTTATTGGGAATTTG
CAGAGCGTTAAGGGGAGTCT

Downstream 100 bases:

>100_bases
CCCGATCGCACCCGGCGTTGACCGGGCGCGTCGGCCGGGGCTATGCCGGCGTCTCTTGCACCAGTGCTTCGATCGCTTTT
TCAGCCTGAGCCAGGTGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTYQQAGWVAIAKRLLGWIVFIPALLSTLISLLGFLYQHSEKQQGINAVMLDFMHVMIDMVRFNMTFLDFFWQHSPLPRG
DAGLSGANFLFLVIYWMIFVGMALCASGARMSRQVRHIREGLEDHLILERAKGETGQTRAQLEQRIIIPRHAILLQIFPL
YLLPLIILVLGYLALHLLGMV

Sequences:

>Translated_181_residues
MTYQQAGWVAIAKRLLGWIVFIPALLSTLISLLGFLYQHSEKQQGINAVMLDFMHVMIDMVRFNMTFLDFFWQHSPLPRG
DAGLSGANFLFLVIYWMIFVGMALCASGARMSRQVRHIREGLEDHLILERAKGETGQTRAQLEQRIIIPRHAILLQIFPL
YLLPLIILVLGYLALHLLGMV
>Mature_180_residues
TYQQAGWVAIAKRLLGWIVFIPALLSTLISLLGFLYQHSEKQQGINAVMLDFMHVMIDMVRFNMTFLDFFWQHSPLPRGD
AGLSGANFLFLVIYWMIFVGMALCASGARMSRQVRHIREGLEDHLILERAKGETGQTRAQLEQRIIIPRHAILLQIFPLY
LLPLIILVLGYLALHLLGMV

Specific function: Putative regulator of yfeABCD, an ABC transporter locus involved in inorganic iron transport [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yniB [H]

Homologues:

Organism=Escherichia coli, GI1788020, Length=181, Percent_Identity=58.5635359116022, Blast_Score=221, Evalue=3e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20692; Mature: 20561

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYQQAGWVAIAKRLLGWIVFIPALLSTLISLLGFLYQHSEKQQGINAVMLDFMHVMIDM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRFNMTFLDFFWQHSPLPRGDAGLSGANFLFLVIYWMIFVGMALCASGARMSRQVRHIRE
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GLEDHLILERAKGETGQTRAQLEQRIIIPRHAILLQIFPLYLLPLIILVLGYLALHLLGM
HHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
V
C
>Mature Secondary Structure 
TYQQAGWVAIAKRLLGWIVFIPALLSTLISLLGFLYQHSEKQQGINAVMLDFMHVMIDM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRFNMTFLDFFWQHSPLPRGDAGLSGANFLFLVIYWMIFVGMALCASGARMSRQVRHIRE
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GLEDHLILERAKGETGQTRAQLEQRIIIPRHAILLQIFPLYLLPLIILVLGYLALHLLGM
HHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]