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The map label for this gene is emtA [H]

Identifier: 238919637

GI number: 238919637

Start: 1691646

End: 1692281

Strand: Direct

Name: emtA [H]

Synonym: NT01EI_1738

Alternate gene names: 238919637

Gene position: 1691646-1692281 (Clockwise)

Preceding gene: 238919634

Following gene: 238919638

Centisome position: 44.37

GC content: 55.82

Gene sequence:

>636_bases
ATGTTGGCTGTGCTGCTGCTGGCCGGATGTGCCAAACAGCATATGCCGGCGCCAGCCAAGATAACGCTTAATCAGCATGG
TGGAGGTTTTTTACGCGATTCGGCCGAGATGGATCCGGCGGATGACGGGGCATTCTCAACCTATATCCGCAGCGCGGCCA
ATACCTACAATGTGGATGAGACCCTGATTAAGGCGATCATTCAGGTGGAGTCGGGTGGCGATCCCCGGGCGGTAAGCCGC
TCCAACGCGATAGGTCTCATGCAGTTGAAGCCCTCGACCGCCGGGCGTGATGCCTATCGCAAGAAAGGACGCTACGGTCA
GCCGACCACCCGCGAGCTTAAGGATCCGGCAGTCAATATCGACCTGGGTACCGCCTACCTGAATATTTTGAAGAACCAGC
AGCTGGCCGGGATCACCAATTCCGAGACCATGCGTTATGCGATGATCGTGGCCTATGTCAACGGGGCCGGTGCGATGCTA
CGGACTTTCTCCCGCGATCGTGATACGGCAATTGCCAAAATTAACCGTATGACGCCAAAACAGTTTTACCAATATATTCA
GAAGCGTCACCCGGCCGCTCAGGCACCGCGCTATCTGTGGAAAGTCAATACCGCCTATCTGGCAATGGCGCGTTAA

Upstream 100 bases:

>100_bases
AATCAGCTAGCCATGCCCCTTTTTTTTCTGGCACCATTCCCCAATTCATTTTTTACGTAAAAGTAGAGGTGCCGTGACGG
TGAAGATTCGACTCGGTTGT

Downstream 100 bases:

>100_bases
TTCAGGCTCACTCCTGACTGTGGTTAGCCCCGATTCGTTAGTCGGTTAACCACAGTCATCCTCCCCGAACCGCCCGAGAA
AACCGTTTGAGTCTTCTTGA

Product: endotype membrane-bound lytic murein transglycosylase A

Products: NA

Alternate protein names: Peptidoglycan lytic endotransglycosylase [H]

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLAVLLLAGCAKQHMPAPAKITLNQHGGGFLRDSAEMDPADDGAFSTYIRSAANTYNVDETLIKAIIQVESGGDPRAVSR
SNAIGLMQLKPSTAGRDAYRKKGRYGQPTTRELKDPAVNIDLGTAYLNILKNQQLAGITNSETMRYAMIVAYVNGAGAML
RTFSRDRDTAIAKINRMTPKQFYQYIQKRHPAAQAPRYLWKVNTAYLAMAR

Sequences:

>Translated_211_residues
MLAVLLLAGCAKQHMPAPAKITLNQHGGGFLRDSAEMDPADDGAFSTYIRSAANTYNVDETLIKAIIQVESGGDPRAVSR
SNAIGLMQLKPSTAGRDAYRKKGRYGQPTTRELKDPAVNIDLGTAYLNILKNQQLAGITNSETMRYAMIVAYVNGAGAML
RTFSRDRDTAIAKINRMTPKQFYQYIQKRHPAAQAPRYLWKVNTAYLAMAR
>Mature_211_residues
MLAVLLLAGCAKQHMPAPAKITLNQHGGGFLRDSAEMDPADDGAFSTYIRSAANTYNVDETLIKAIIQVESGGDPRAVSR
SNAIGLMQLKPSTAGRDAYRKKGRYGQPTTRELKDPAVNIDLGTAYLNILKNQQLAGITNSETMRYAMIVAYVNGAGAML
RTFSRDRDTAIAKINRMTPKQFYQYIQKRHPAAQAPRYLWKVNTAYLAMAR

Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. Preferentially cleaves at a distance of more than two disaccharide units from the ends of the glycan chain [H]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI87081855, Length=210, Percent_Identity=47.6190476190476, Blast_Score=190, Evalue=5e-50,
Organism=Escherichia coli, GI87082191, Length=157, Percent_Identity=53.5031847133758, Blast_Score=164, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 23243; Mature: 23243

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS00922 TRANSGLYCOSYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVLLLAGCAKQHMPAPAKITLNQHGGGFLRDSAEMDPADDGAFSTYIRSAANTYNVDE
CHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCHHH
TLIKAIIQVESGGDPRAVSRSNAIGLMQLKPSTAGRDAYRKKGRYGQPTTRELKDPAVNI
HHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCHHHCCCEEEE
DLGTAYLNILKNQQLAGITNSETMRYAMIVAYVNGAGAMLRTFSRDRDTAIAKINRMTPK
EHHHHHHHHHHCCCCCCCCCCCHHEEEEEEEEECCCCHHHHHHCCCCHHHHHHHHCCCHH
QFYQYIQKRHPAAQAPRYLWKVNTAYLAMAR
HHHHHHHHCCCHHHCCCEEEEECHHEEEECC
>Mature Secondary Structure
MLAVLLLAGCAKQHMPAPAKITLNQHGGGFLRDSAEMDPADDGAFSTYIRSAANTYNVDE
CHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCHHH
TLIKAIIQVESGGDPRAVSRSNAIGLMQLKPSTAGRDAYRKKGRYGQPTTRELKDPAVNI
HHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCHHHCCCEEEE
DLGTAYLNILKNQQLAGITNSETMRYAMIVAYVNGAGAMLRTFSRDRDTAIAKINRMTPK
EHHHHHHHHHHCCCCCCCCCCCHHEEEEEEEEECCCCHHHHHHCCCCHHHHHHHHCCCHH
QFYQYIQKRHPAAQAPRYLWKVNTAYLAMAR
HHHHHHHHCCCHHHCCCEEEEECHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA