| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yoaE [H]
Identifier: 238919623
GI number: 238919623
Start: 1677848
End: 1679404
Strand: Direct
Name: yoaE [H]
Synonym: NT01EI_1722
Alternate gene names: 238919623
Gene position: 1677848-1679404 (Clockwise)
Preceding gene: 238919618
Following gene: 238919624
Centisome position: 44.01
GC content: 59.79
Gene sequence:
>1557_bases ATGGAGCTGTTATTGGATCCTTCCATCTGGGCCGGTCTGCTGACGCTGGTGGTGCTGGAAATTGTCCTGGGCATCGACAA CCTGGTGTTTGTCGCCATTCTGGCCGAGAAGGTGCCGCCGCAGCAGCGCGACCGGGCCAGGCTGATTGGACTCGGCTTGG CGCTGATTATGCGCCTGGCGCTACTGTCACTTATTTCATGGATGGTGACGCTGACCCGTCCGCTGTTCAGTATCGCCATG TTTACCTTCTCCGGACGTGATGTGATCCTGCTGCTGGGGGGGCTGTTCCTGCTGTTTAAGGCTACCATGGAGCTGCATGA ACGCCTGGAAGGACGGGTGCATGAGGTCAGCCATAAAGGCTATGCCAGTTTTTGGTCGGTGGTTGTACAGATAGTGATCC TCGATGCCGTTTTCTCGCTGGATGCCGTGATCACCGCTGTTGGGATGGTAGATCATCTGGCGGTGATGATGCTGGCGGTG GTGATCGCGATGGTGATCATGCTGCTGGCCTCTAAGAGGCTGACGCGTTTCGTTAACGCCCATCCCACCGTGGTGGTGCT GTGCCTTAGCTTTCTGCTGATGATCGGTCTGAGTCTGATGGCCGAAGGCTTTGGTCTGCATATTCCCAAAGGGTACCTGT ATGCAGCGATCGGTTTCTCGATCCTGATTGAAATGTTCAACCAGATAGCCAGGCGGAATTATCTGCGCCATGAGCAGCGC AGGCCGATGCGTCAGCGCACCGCCGAGGCCATTATGCGCCTGATGGGCGGCGGTCGCGGCGAAGGAGCGGCGGCTCCGGT GGATGTGGCGCTGGTGCCGGGTGCAGCGAGTGCCTTTGCCGCCGAGGAGCGCTATATGATAAGCGGGGTGCTCACTCTGG CCTCGCGCTCGCTGCGCACGATTATGACGCCGCGTAATGAAATCTCGTGGATCGATTGCCGCCAGCCGGCGGATGAGATC CGTCGCCAGCTGATGGAGACGCCGCACAGCCTGTTTCCAGTGTGTGAGGGATCGCTGGATCAGCTGCTGGGCGTGGTCCG GGCGAAAGATTTGCTGATGGCGCTGAAGCAGAATACGCCGCTGGCCGAGTTCGCGGCCCAGCATACACCGATCGTCGTAC TCGAGAGCCTGGATGTGATCAATGTGCTGGATGTGCTGCGTCAGGCGAAGGGACGGCTGGTGATGGTCAGCGATGAGTTT GGTGTCGTTCAGGGACTGGTTACGCCGCTGGATGTACTGGAGGCCATCGCCGGCGAGTTCCCGGATGAGGATGAGGCGCT GGATATCGTGGGTAATGAGCAGGGGTGGCTGGTTAAGGGCAGCACCGATCTGCACACCCTGGAGCAGACGCTGGACGTTC ACGGACTGGTGCTGGGCAGTGGTACGCAGTATGCCTCGTTGGCCGGGCTTCTGCTGGCGCATTTTGACCGGATGCCGGCG GTGGGGGCGGCGTTGATGCTGAGCGGCCTGCGTTTTACCGTCGCTGAGGTAGAAGAGTACCGCATCGAACGGGTACAGGT AGAACGCGTCGGCAGTATGCCGGATCCGTCCGCCTAA
Upstream 100 bases:
>100_bases GGGCGCTATGGCACATGCCTTGGCCTGTTTTGCGTCTGCGCTGCTTCCTACTGTCGTTCGGCTCAAGCGCCGGTGCGCTG ACGATGGCAGGTAACCCATG
Downstream 100 bases:
>100_bases GTTTGCGCCGGGGCGTGGGAGATCCCTCCCGCGCCTTGCGTCGTCTGCGCTGAATCGACACTCCAGTGCTGGTGGGCGTA CCAGTATGAGAAATCCCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MELLLDPSIWAGLLTLVVLEIVLGIDNLVFVAILAEKVPPQQRDRARLIGLGLALIMRLALLSLISWMVTLTRPLFSIAM FTFSGRDVILLLGGLFLLFKATMELHERLEGRVHEVSHKGYASFWSVVVQIVILDAVFSLDAVITAVGMVDHLAVMMLAV VIAMVIMLLASKRLTRFVNAHPTVVVLCLSFLLMIGLSLMAEGFGLHIPKGYLYAAIGFSILIEMFNQIARRNYLRHEQR RPMRQRTAEAIMRLMGGGRGEGAAAPVDVALVPGAASAFAAEERYMISGVLTLASRSLRTIMTPRNEISWIDCRQPADEI RRQLMETPHSLFPVCEGSLDQLLGVVRAKDLLMALKQNTPLAEFAAQHTPIVVLESLDVINVLDVLRQAKGRLVMVSDEF GVVQGLVTPLDVLEAIAGEFPDEDEALDIVGNEQGWLVKGSTDLHTLEQTLDVHGLVLGSGTQYASLAGLLLAHFDRMPA VGAALMLSGLRFTVAEVEEYRIERVQVERVGSMPDPSA
Sequences:
>Translated_518_residues MELLLDPSIWAGLLTLVVLEIVLGIDNLVFVAILAEKVPPQQRDRARLIGLGLALIMRLALLSLISWMVTLTRPLFSIAM FTFSGRDVILLLGGLFLLFKATMELHERLEGRVHEVSHKGYASFWSVVVQIVILDAVFSLDAVITAVGMVDHLAVMMLAV VIAMVIMLLASKRLTRFVNAHPTVVVLCLSFLLMIGLSLMAEGFGLHIPKGYLYAAIGFSILIEMFNQIARRNYLRHEQR RPMRQRTAEAIMRLMGGGRGEGAAAPVDVALVPGAASAFAAEERYMISGVLTLASRSLRTIMTPRNEISWIDCRQPADEI RRQLMETPHSLFPVCEGSLDQLLGVVRAKDLLMALKQNTPLAEFAAQHTPIVVLESLDVINVLDVLRQAKGRLVMVSDEF GVVQGLVTPLDVLEAIAGEFPDEDEALDIVGNEQGWLVKGSTDLHTLEQTLDVHGLVLGSGTQYASLAGLLLAHFDRMPA VGAALMLSGLRFTVAEVEEYRIERVQVERVGSMPDPSA >Mature_518_residues MELLLDPSIWAGLLTLVVLEIVLGIDNLVFVAILAEKVPPQQRDRARLIGLGLALIMRLALLSLISWMVTLTRPLFSIAM FTFSGRDVILLLGGLFLLFKATMELHERLEGRVHEVSHKGYASFWSVVVQIVILDAVFSLDAVITAVGMVDHLAVMMLAV VIAMVIMLLASKRLTRFVNAHPTVVVLCLSFLLMIGLSLMAEGFGLHIPKGYLYAAIGFSILIEMFNQIARRNYLRHEQR RPMRQRTAEAIMRLMGGGRGEGAAAPVDVALVPGAASAFAAEERYMISGVLTLASRSLRTIMTPRNEISWIDCRQPADEI RRQLMETPHSLFPVCEGSLDQLLGVVRAKDLLMALKQNTPLAEFAAQHTPIVVLESLDVINVLDVLRQAKGRLVMVSDEF GVVQGLVTPLDVLEAIAGEFPDEDEALDIVGNEQGWLVKGSTDLHTLEQTLDVHGLVLGSGTQYASLAGLLLAHFDRMPA VGAALMLSGLRFTVAEVEEYRIERVQVERVGSMPDPSA
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=509, Percent_Identity=66.7976424361493, Blast_Score=664, Evalue=0.0, Organism=Escherichia coli, GI87082033, Length=519, Percent_Identity=51.0597302504817, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI1789197, Length=228, Percent_Identity=50.4385964912281, Blast_Score=203, Evalue=2e-53, Organism=Escherichia coli, GI1790664, Length=240, Percent_Identity=25.8333333333333, Blast_Score=112, Evalue=8e-26, Organism=Escherichia coli, GI1786879, Length=249, Percent_Identity=29.718875502008, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI145693175, Length=246, Percent_Identity=23.9837398373984, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 56797; Mature: 56797
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLLDPSIWAGLLTLVVLEIVLGIDNLVFVAILAEKVPPQQRDRARLIGLGLALIMRLA CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LLSLISWMVTLTRPLFSIAMFTFSGRDVILLLGGLFLLFKATMELHERLEGRVHEVSHKG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YASFWSVVVQIVILDAVFSLDAVITAVGMVDHLAVMMLAVVIAMVIMLLASKRLTRFVNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HPTVVVLCLSFLLMIGLSLMAEGFGLHIPKGYLYAAIGFSILIEMFNQIARRNYLRHEQR CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPMRQRTAEAIMRLMGGGRGEGAAAPVDVALVPGAASAFAAEERYMISGVLTLASRSLRT CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH IMTPRNEISWIDCRQPADEIRRQLMETPHSLFPVCEGSLDQLLGVVRAKDLLMALKQNTP HCCCCCCCCEEECCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC LAEFAAQHTPIVVLESLDVINVLDVLRQAKGRLVMVSDEFGVVQGLVTPLDVLEAIAGEF HHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCC PDEDEALDIVGNEQGWLVKGSTDLHTLEQTLDVHGLVLGSGTQYASLAGLLLAHFDRMPA CCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCH VGAALMLSGLRFTVAEVEEYRIERVQVERVGSMPDPSA HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MELLLDPSIWAGLLTLVVLEIVLGIDNLVFVAILAEKVPPQQRDRARLIGLGLALIMRLA CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LLSLISWMVTLTRPLFSIAMFTFSGRDVILLLGGLFLLFKATMELHERLEGRVHEVSHKG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YASFWSVVVQIVILDAVFSLDAVITAVGMVDHLAVMMLAVVIAMVIMLLASKRLTRFVNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HPTVVVLCLSFLLMIGLSLMAEGFGLHIPKGYLYAAIGFSILIEMFNQIARRNYLRHEQR CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPMRQRTAEAIMRLMGGGRGEGAAAPVDVALVPGAASAFAAEERYMISGVLTLASRSLRT CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH IMTPRNEISWIDCRQPADEIRRQLMETPHSLFPVCEGSLDQLLGVVRAKDLLMALKQNTP HCCCCCCCCEEECCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC LAEFAAQHTPIVVLESLDVINVLDVLRQAKGRLVMVSDEFGVVQGLVTPLDVLEAIAGEF HHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCC PDEDEALDIVGNEQGWLVKGSTDLHTLEQTLDVHGLVLGSGTQYASLAGLLLAHFDRMPA CCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCH VGAALMLSGLRFTVAEVEEYRIERVQVERVGSMPDPSA HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]