| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238919602
Identifier: 238919602
GI number: 238919602
Start: 1658796
End: 1659092
Strand: Reverse
Name: 238919602
Synonym: NT01EI_1701
Alternate gene names: NA
Gene position: 1659092-1658796 (Counterclockwise)
Preceding gene: 238919606
Following gene: 238919601
Centisome position: 43.52
GC content: 58.59
Gene sequence:
>297_bases ATGACCGACGTTTCTTCTGCCACTTCAACCACCGGCCGCCTGCGTAGTTTTCTGCAGCAGCAGATGCAATACTGGCGGAT GTATCTGTCGCGCCAGTCGCGCAAGATGGGGCTGGAGGGTAAATTGCGCCAGGCACCGATGCTGGTGAGCGCCGTCGTAA TGATGATCCTGCTGATAGCTGGTTTCCTGCTGTTTAATCTGGTGGTCTTAAGCGTTGCCATCATAGGCGGCCTGCTGGCG CTGCTACGCCCGCGCCGCCCGATAACCCAGGGACCGCGCCACTCTAATCCCTTCTGA
Upstream 100 bases:
>100_bases TCAGGGGCGTAAAATTGCCTAAATCCACTGGGCCAGGCGCCAGGGATCCCGTAGGCTGTCGCCATCCCGCGCGATCCCGC CGGGTTTTAAAGGAGTTTCT
Downstream 100 bases:
>100_bases TTTTCCGGCCGCCGCCGGTGCGCTTCAGCCATCAGCGCGGCGGCCAGCCCTTTTTCCCTCCGCCAAATTCTGAAATAATA GTCCGATATTCAACGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTDVSSATSTTGRLRSFLQQQMQYWRMYLSRQSRKMGLEGKLRQAPMLVSAVVMMILLIAGFLLFNLVVLSVAIIGGLLA LLRPRRPITQGPRHSNPF
Sequences:
>Translated_98_residues MTDVSSATSTTGRLRSFLQQQMQYWRMYLSRQSRKMGLEGKLRQAPMLVSAVVMMILLIAGFLLFNLVVLSVAIIGGLLA LLRPRRPITQGPRHSNPF >Mature_97_residues TDVSSATSTTGRLRSFLQQQMQYWRMYLSRQSRKMGLEGKLRQAPMLVSAVVMMILLIAGFLLFNLVVLSVAIIGGLLAL LRPRRPITQGPRHSNPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11034; Mature: 10902
Theoretical pI: Translated: 12.51; Mature: 12.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVSSATSTTGRLRSFLQQQMQYWRMYLSRQSRKMGLEGKLRQAPMLVSAVVMMILLIA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GFLLFNLVVLSVAIIGGLLALLRPRRPITQGPRHSNPF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TDVSSATSTTGRLRSFLQQQMQYWRMYLSRQSRKMGLEGKLRQAPMLVSAVVMMILLIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GFLLFNLVVLSVAIIGGLLALLRPRRPITQGPRHSNPF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA