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The map label for this gene is holE [H]

Identifier: 238919601

GI number: 238919601

Start: 1658464

End: 1658691

Strand: Reverse

Name: holE [H]

Synonym: NT01EI_1700

Alternate gene names: 238919601

Gene position: 1658691-1658464 (Counterclockwise)

Preceding gene: 238919602

Following gene: 238919600

Centisome position: 43.51

GC content: 54.39

Gene sequence:

>228_bases
ATGAGTTTTAATCTGGCGACGCTGCCCCAGGCACAGATGGATCGCATCAATGTCGATCTGGCGGCCAGCGGGATATCCTA
TAAAGAGCGTTACCATATGCCGGTGATCGCAGAACAGGTCGAACGCGAGCAGCCCGAGGCGCTACGCAGCTACTTCCGGG
AACGCCTGCAGTATTATCGTACCCTGACACTGCCAACCCTCCCTTATGATATAGATGGTAACCGCTAA

Upstream 100 bases:

>100_bases
CCGGCCGCCGCCGGTGCGCTTCAGCCATCAGCGCGGCGGCCAGCCCTTTTTCCCTCCGCCAAATTCTGAAATAATAGTCC
GATATTCAACGGAGGCTATT

Downstream 100 bases:

>100_bases
GGTGCCCAGGCCATTTTCCACCACGGAGAGCCGATGACCCAGCAACAACGCAATGCCGCACTGGTCTGCGCCCTGAGCGA
ATGGATCGAGCGACACCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MSFNLATLPQAQMDRINVDLAASGISYKERYHMPVIAEQVEREQPEALRSYFRERLQYYRTLTLPTLPYDIDGNR

Sequences:

>Translated_75_residues
MSFNLATLPQAQMDRINVDLAASGISYKERYHMPVIAEQVEREQPEALRSYFRERLQYYRTLTLPTLPYDIDGNR
>Mature_74_residues
SFNLATLPQAQMDRINVDLAASGISYKERYHMPVIAEQVEREQPEALRSYFRERLQYYRTLTLPTLPYDIDGNR

Specific function: The exact function of the theta subunit is unknown [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788147, Length=72, Percent_Identity=62.5, Blast_Score=94, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009052
- InterPro:   IPR011325
- ProDom:   PD057609 [H]

Pfam domain/function: PF06440 DNA_pol3_theta [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 8852; Mature: 8721

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNLATLPQAQMDRINVDLAASGISYKERYHMPVIAEQVEREQPEALRSYFRERLQYYR
CCCCCCCCCHHHHHHCCCEEECCCCCHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
TLTLPTLPYDIDGNR
HCCCCCCCCCCCCCC
>Mature Secondary Structure 
SFNLATLPQAQMDRINVDLAASGISYKERYHMPVIAEQVEREQPEALRSYFRERLQYYR
CCCCCCCCHHHHHHCCCEEECCCCCHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
TLTLPTLPYDIDGNR
HCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]