Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919578

Identifier: 238919578

GI number: 238919578

Start: 1638211

End: 1638711

Strand: Reverse

Name: 238919578

Synonym: NT01EI_1677

Alternate gene names: NA

Gene position: 1638711-1638211 (Counterclockwise)

Preceding gene: 238919580

Following gene: 238919575

Centisome position: 42.98

GC content: 51.1

Gene sequence:

>501_bases
ATGGCAAACAGCAAGAAACCTGCGAAAACCTCTATTGGCCTGGATCCAAAACAGTCCGCTGTCCTAGCGGATGCCCTCAA
TGCCCTGCTGGCCAACTACCAAATTCTTTATATGAATGTGCGAGGCTATCACTGGAACATCAGTGGACCACAATTTTTTG
AACTGCATGTCAAGTTTGAGGAGACCTATAACGATCTGTTGCTCAAGGTCGATGAGCTGGCCGAGCGTATTCTGACGCTG
GGATACCGGCCACGCCACGCTTTCAGCGACTATCTACAACAGGCAACGGTAAAAGAGGATGTCAATGTCACCGACGATCG
CGGTACCCTACAGGGATTATTGGGCGGCTATGCCCTGCTGCTGCAGCAACAGCGGGAAATTCTGCATCTGGCCACAGAAG
CCGACGACGAAGGGACAGTATCACTGATGAGTGACTACATCAAACAGCAGGAAAAACAGGTGTGGATGCTGAATGCCTAT
CTGGGCAGTAACCAGCCCTGA

Upstream 100 bases:

>100_bases
TCTGGCAGGATGGGTAAAAATTCGGCAAAACTCGCGTTCCCCCGATTGACCCGGTGTCAATCCTGTCTGCATCCACGTAT
CACTCAAGGAGAGTCTGCCC

Downstream 100 bases:

>100_bases
TAGTCTCCCTATCCTTTACTGACTGAGCCCATAAACTGGGGCAGTCATACCCGGCCTGTCAAGATGGCCTGGGCCGGTAC
TCTACCGGACTCAGGCCATC

Product: metalloregulation DNA-binding stress protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MANSKKPAKTSIGLDPKQSAVLADALNALLANYQILYMNVRGYHWNISGPQFFELHVKFEETYNDLLLKVDELAERILTL
GYRPRHAFSDYLQQATVKEDVNVTDDRGTLQGLLGGYALLLQQQREILHLATEADDEGTVSLMSDYIKQQEKQVWMLNAY
LGSNQP

Sequences:

>Translated_166_residues
MANSKKPAKTSIGLDPKQSAVLADALNALLANYQILYMNVRGYHWNISGPQFFELHVKFEETYNDLLLKVDELAERILTL
GYRPRHAFSDYLQQATVKEDVNVTDDRGTLQGLLGGYALLLQQQREILHLATEADDEGTVSLMSDYIKQQEKQVWMLNAY
LGSNQP
>Mature_165_residues
ANSKKPAKTSIGLDPKQSAVLADALNALLANYQILYMNVRGYHWNISGPQFFELHVKFEETYNDLLLKVDELAERILTLG
YRPRHAFSDYLQQATVKEDVNVTDDRGTLQGLLGGYALLLQQQREILHLATEADDEGTVSLMSDYIKQQEKQVWMLNAYL
GSNQP

Specific function: Unknown

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 18819; Mature: 18687

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSKKPAKTSIGLDPKQSAVLADALNALLANYQILYMNVRGYHWNISGPQFFELHVKFE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCEEEECCCCEEEEEEEEHH
ETYNDLLLKVDELAERILTLGYRPRHAFSDYLQQATVKEDVNVTDDRGTLQGLLGGYALL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LQQQREILHLATEADDEGTVSLMSDYIKQQEKQVWMLNAYLGSNQP
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCC
>Mature Secondary Structure 
ANSKKPAKTSIGLDPKQSAVLADALNALLANYQILYMNVRGYHWNISGPQFFELHVKFE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCEEEECCCCEEEEEEEEHH
ETYNDLLLKVDELAERILTLGYRPRHAFSDYLQQATVKEDVNVTDDRGTLQGLLGGYALL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LQQQREILHLATEADDEGTVSLMSDYIKQQEKQVWMLNAYLGSNQP
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]