| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is cls
Identifier: 238919575
GI number: 238919575
Start: 1634011
End: 1635471
Strand: Reverse
Name: cls
Synonym: NT01EI_1674
Alternate gene names: 238919575
Gene position: 1635471-1634011 (Counterclockwise)
Preceding gene: 238919578
Following gene: 238919574
Centisome position: 42.9
GC content: 57.15
Gene sequence:
>1461_bases ATGAGCACTTTTTATACAGTAATCAGCTGGCTGGCGATCTTTGGCTACTGGCTGCTTATCGCCAGCGTCACGTTACGGAT ATTGATGAAGCGTCGGGCTGTTCCCTCTGCCATGGCGTGGCTGCTGATCATTTACATCCTGCCACTGGTCGGCATTATCG CCTATCTCTCCTTTGGTGAGCTGCATCTGGGAAAACGCCGCGCCGAGCGCGCGCGTACGATGTGGCCATCCACCGCACGC TGGTTGGCCGATCTGCGCAGCTGCCGCAGCATTTTTGCCACCCACAACAGCGAGGTCGCCGCACCGCTGTTCCAGCTGTG TGAACGGCGCCAGGGTATCGCCGGTGTTAAGGGTAACCAGCTACAGCTGCTGACCTCTACCGATGATACGCTCAATGCCC TGATCCGCGATATTGAGCTGGCGCATACCAGCATTGAGATGATGTTTTATATTTGGCAACCCGGTGGATTGGCCGATCGG GTTGCCGAAGCGATGATGGCAGCAGCAAGACGCGGCATACGTTGCCGCCTGATGCTCGATTCGGCCGGCAGCGTGGCATT TTTCCGCAGCCCTTATCCAGCCATGATGCGCGAAGCGGGTATTGAGGTCGTAGAGGCGCTGCAGGTCAACCTGCTGCGTG TTTTCCTGCGCCGTATGGATCTACGTCAGCACCGCAAAGTGGTGCTGATCGACAACTTTATCGCCTATACCGGCAGCATG AACCTGGTTGACCCGCGCTACTTTAAGCAGGACGCCGGTGTCGGCCAGTGGATCGATGTCATGGCGCGCATGGAGGGGCC GGTCGCAACCACCATGGGCATCTACTATGCCTTCGACTGGGAGATGGAGACCGGTAAACGTATTCTGCCACCGGAGCCGA TATGCAATATTCTCCCCTTTGAAAAAGAGTCGGGCCACACCATTCAGGTGATCGCCTCCGGCCCCGGCTTTCCGGAAGAG CTGATCCACCAATCACTGTTGACCGCCGTCTACTCCGCGCGCCAACAGCTGGTGATGACCACACCCTATTTTGTTCCCAG TGACGACCTGTTGCATGCCATCTGTACCGCCGCCCAGCGCGGTGTGGATGTCTCAATCATCGTGCCGAAAAAGAATGACT CGATGATGGTCGGCTGGGCCAGCCGCGCCTTTTTTACCGAAATGCTGGCCGCCGGCGTTAAAATCTATCAGTTTGAAGGC GGCCTGTTGCATACCAAGAGCGTGCTGGTCGACGGCCAGCTCAGTCTGGTCGGTACCGTCAACCTGGATATGCGCAGCCT GTGGCTTAATTTCGAAATTACGCTGGTCATCGACGACGACGGCTTCGGCAGCGATCTCGCCTGCGTACAAGAGGACTATA TCGCCCGCTCCTCCCTGCTGGACCCACTGGAGTGGTTAAAACGCCCACTGTGGCAACGCGTCGTCGAACGCCTCTTTTAC TTTTTCAGCCCTTTGCTGTAA
Upstream 100 bases:
>100_bases ACGCCACGAACTGTATATATTTAGCCGCTAAAGGTTTCTTCTTTGTATATCTGTGCGTAAACTCTCAATTGATGGATTTG TGCAAGGACAACCTGCGGTT
Downstream 100 bases:
>100_bases CCGTCTGCGGTCGGCCTACGCCCGACTGCGGCCCCCAATGAGATACTGACATGATGGATTTAAACAACCGCCTGAACGAA GAAGAGACCCTGGATCAGGC
Product: cardiolipin synthetase
Products: NA
Alternate protein names: CL synthase
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MSTFYTVISWLAIFGYWLLIASVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGELHLGKRRAERARTMWPSTAR WLADLRSCRSIFATHNSEVAAPLFQLCERRQGIAGVKGNQLQLLTSTDDTLNALIRDIELAHTSIEMMFYIWQPGGLADR VAEAMMAAARRGIRCRLMLDSAGSVAFFRSPYPAMMREAGIEVVEALQVNLLRVFLRRMDLRQHRKVVLIDNFIAYTGSM NLVDPRYFKQDAGVGQWIDVMARMEGPVATTMGIYYAFDWEMETGKRILPPEPICNILPFEKESGHTIQVIASGPGFPEE LIHQSLLTAVYSARQQLVMTTPYFVPSDDLLHAICTAAQRGVDVSIIVPKKNDSMMVGWASRAFFTEMLAAGVKIYQFEG GLLHTKSVLVDGQLSLVGTVNLDMRSLWLNFEITLVIDDDGFGSDLACVQEDYIARSSLLDPLEWLKRPLWQRVVERLFY FFSPLL
Sequences:
>Translated_486_residues MSTFYTVISWLAIFGYWLLIASVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGELHLGKRRAERARTMWPSTAR WLADLRSCRSIFATHNSEVAAPLFQLCERRQGIAGVKGNQLQLLTSTDDTLNALIRDIELAHTSIEMMFYIWQPGGLADR VAEAMMAAARRGIRCRLMLDSAGSVAFFRSPYPAMMREAGIEVVEALQVNLLRVFLRRMDLRQHRKVVLIDNFIAYTGSM NLVDPRYFKQDAGVGQWIDVMARMEGPVATTMGIYYAFDWEMETGKRILPPEPICNILPFEKESGHTIQVIASGPGFPEE LIHQSLLTAVYSARQQLVMTTPYFVPSDDLLHAICTAAQRGVDVSIIVPKKNDSMMVGWASRAFFTEMLAAGVKIYQFEG GLLHTKSVLVDGQLSLVGTVNLDMRSLWLNFEITLVIDDDGFGSDLACVQEDYIARSSLLDPLEWLKRPLWQRVVERLFY FFSPLL >Mature_485_residues STFYTVISWLAIFGYWLLIASVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGELHLGKRRAERARTMWPSTARW LADLRSCRSIFATHNSEVAAPLFQLCERRQGIAGVKGNQLQLLTSTDDTLNALIRDIELAHTSIEMMFYIWQPGGLADRV AEAMMAAARRGIRCRLMLDSAGSVAFFRSPYPAMMREAGIEVVEALQVNLLRVFLRRMDLRQHRKVVLIDNFIAYTGSMN LVDPRYFKQDAGVGQWIDVMARMEGPVATTMGIYYAFDWEMETGKRILPPEPICNILPFEKESGHTIQVIASGPGFPEEL IHQSLLTAVYSARQQLVMTTPYFVPSDDLLHAICTAAQRGVDVSIIVPKKNDSMMVGWASRAFFTEMLAAGVKIYQFEGG LLHTKSVLVDGQLSLVGTVNLDMRSLWLNFEITLVIDDDGFGSDLACVQEDYIARSSLLDPLEWLKRPLWQRVVERLFYF FSPLL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains
Homologues:
Organism=Escherichia coli, GI1787502, Length=486, Percent_Identity=82.9218106995885, Blast_Score=856, Evalue=0.0, Organism=Escherichia coli, GI1787007, Length=345, Percent_Identity=27.2463768115942, Blast_Score=104, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CLS_EDWI9 (C5BDA3)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002933090.1 - GeneID: 7958907 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_1674 - OMA: AYSAHEY - ProtClustDB: PRK01642 - HAMAP: MF_00190 - InterPro: IPR022924 - InterPro: IPR001736 - SMART: SM00155
Pfam domain/function: NA
EC number: 2.7.8.-
Molecular weight: Translated: 54967; Mature: 54836
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS50035 PLD
Important sites: ACT_SITE 224-224 ACT_SITE 226-226 ACT_SITE 231-231 ACT_SITE 404-404 ACT_SITE 406-406 ACT_SITE 411-411
Signals:
None
Transmembrane regions:
HASH(0x1ce93ff4)-; HASH(0x1a8b2378)-;
Cys/Met content:
1.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFYTVISWLAIFGYWLLIASVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCH LHLGKRRAERARTMWPSTARWLADLRSCRSIFATHNSEVAAPLFQLCERRQGIAGVKGNQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCE LQLLTSTDDTLNALIRDIELAHTSIEMMFYIWQPGGLADRVAEAMMAAARRGIRCRLMLD EEEEECCCHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEC SAGSVAFFRSPYPAMMREAGIEVVEALQVNLLRVFLRRMDLRQHRKVVLIDNFIAYTGSM CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCC NLVDPRYFKQDAGVGQWIDVMARMEGPVATTMGIYYAFDWEMETGKRILPPEPICNILPF CCCCCHHHHHCCCCCHHHHHHHHCCCCCEEHEEEEEEEEEECCCCCCCCCCCCCCCCCCC EKESGHTIQVIASGPGFPEELIHQSLLTAVYSARQQLVMTTPYFVPSDDLLHAICTAAQR CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHC GVDVSIIVPKKNDSMMVGWASRAFFTEMLAAGVKIYQFEGGLLHTKSVLVDGQLSLVGTV CCEEEEEEECCCCCEEEEEHHHHHHHHHHHCCCEEEEECCCEEEEEEEEECCCEEEEEEE NLDMRSLWLNFEITLVIDDDGFGSDLACVQEDYIARSSLLDPLEWLKRPLWQRVVERLFY CCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FFSPLL HHHCCH >Mature Secondary Structure STFYTVISWLAIFGYWLLIASVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCH LHLGKRRAERARTMWPSTARWLADLRSCRSIFATHNSEVAAPLFQLCERRQGIAGVKGNQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCE LQLLTSTDDTLNALIRDIELAHTSIEMMFYIWQPGGLADRVAEAMMAAARRGIRCRLMLD EEEEECCCHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEC SAGSVAFFRSPYPAMMREAGIEVVEALQVNLLRVFLRRMDLRQHRKVVLIDNFIAYTGSM CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCC NLVDPRYFKQDAGVGQWIDVMARMEGPVATTMGIYYAFDWEMETGKRILPPEPICNILPF CCCCCHHHHHCCCCCHHHHHHHHCCCCCEEHEEEEEEEEEECCCCCCCCCCCCCCCCCCC EKESGHTIQVIASGPGFPEELIHQSLLTAVYSARQQLVMTTPYFVPSDDLLHAICTAAQR CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHC GVDVSIIVPKKNDSMMVGWASRAFFTEMLAAGVKIYQFEGGLLHTKSVLVDGQLSLVGTV CCEEEEEEECCCCCEEEEEHHHHHHHHHHHCCCEEEEECCCEEEEEEEEECCCEEEEEEE NLDMRSLWLNFEITLVIDDDGFGSDLACVQEDYIARSSLLDPLEWLKRPLWQRVVERLFY CCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FFSPLL HHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA