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The map label for this gene is yciU [C]

Identifier: 238919574

GI number: 238919574

Start: 1633622

End: 1633960

Strand: Reverse

Name: yciU [C]

Synonym: NT01EI_1673

Alternate gene names: 238919574

Gene position: 1633960-1633622 (Counterclockwise)

Preceding gene: 238919575

Following gene: 238919567

Centisome position: 42.86

GC content: 53.69

Gene sequence:

>339_bases
ATGATGGATTTAAACAACCGCCTGAACGAAGAAGAGACCCTGGATCAGGCCTACGATATTTTCCTGGAGCTGGCGGCGGA
CAATCTGGATCCGGCGGATGTGCTGCTGTTTAACCTGCAGTTTGAGCAGCGCGGTGCCGCCGAGCTGTTCGATCCGGCTG
AGGACTGGCAGGAGCATGTTGAGGTTGAGGTCGATCTCAACCCGGATTTCTATGCCGAGGTGGTGATTGGACTGACCAAC
GGTAACCCGGACAGCGACGATATCGAGGATGTCTTCGCCCGTATTCTGATCTGTCGGGAGAAGGATCATAAAATGTGCCA
TATCCTGTGGAAAGAGTAG

Upstream 100 bases:

>100_bases
GGCAACGCGTCGTCGAACGCCTCTTTTACTTTTTCAGCCCTTTGCTGTAACCGTCTGCGGTCGGCCTACGCCCGACTGCG
GCCCCCAATGAGATACTGAC

Downstream 100 bases:

>100_bases
CACCGCCGCTCTCGGAGCCATAAAAAAACCGCCGTCAGGCGGTTTTTTTATGGCTCCGTTCGGCTATAGCGGATCGACCT
TCAGGCAGGAGACCGCATGA

Product: dsDNA-mimic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MMDLNNRLNEEETLDQAYDIFLELAADNLDPADVLLFNLQFEQRGAAELFDPAEDWQEHVEVEVDLNPDFYAEVVIGLTN
GNPDSDDIEDVFARILICREKDHKMCHILWKE

Sequences:

>Translated_112_residues
MMDLNNRLNEEETLDQAYDIFLELAADNLDPADVLLFNLQFEQRGAAELFDPAEDWQEHVEVEVDLNPDFYAEVVIGLTN
GNPDSDDIEDVFARILICREKDHKMCHILWKE
>Mature_112_residues
MMDLNNRLNEEETLDQAYDIFLELAADNLDPADVLLFNLQFEQRGAAELFDPAEDWQEHVEVEVDLNPDFYAEVVIGLTN
GNPDSDDIEDVFARILICREKDHKMCHILWKE

Specific function: Unknown

COG id: COG3099

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0263 family [H]

Homologues:

Organism=Escherichia coli, GI87081860, Length=111, Percent_Identity=78.3783783783784, Blast_Score=174, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007376
- ProDom:   PD020447 [H]

Pfam domain/function: PF04269 DUF440 [H]

EC number: NA

Molecular weight: Translated: 13026; Mature: 13026

Theoretical pI: Translated: 3.74; Mature: 3.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDLNNRLNEEETLDQAYDIFLELAADNLDPADVLLFNLQFEQRGAAELFDPAEDWQEHV
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHE
EVEVDLNPDFYAEVVIGLTNGNPDSDDIEDVFARILICREKDHKMCHILWKE
EEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MMDLNNRLNEEETLDQAYDIFLELAADNLDPADVLLFNLQFEQRGAAELFDPAEDWQEHV
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHE
EVEVDLNPDFYAEVVIGLTNGNPDSDDIEDVFARILICREKDHKMCHILWKE
EEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA