| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yeaC [H]
Identifier: 238919547
GI number: 238919547
Start: 1605414
End: 1605671
Strand: Direct
Name: yeaC [H]
Synonym: NT01EI_1643
Alternate gene names: 238919547
Gene position: 1605414-1605671 (Clockwise)
Preceding gene: 238919546
Following gene: 238919551
Centisome position: 42.11
GC content: 54.65
Gene sequence:
>258_bases ATGGATATTGAGCGCTTGATCTCAATAATGAATGAAGATGTCTACCAGCGTCTGGCAACCGCCGTTGAGCTGGGTAAGTG GCCGGATGGCTCTCGACTGAGTGAGTCGCAGCGTGGCGAGGCGCTGCAAATGGTGATGCTGTACCAGTCGCGCCATAATC ACCAAGCGGCGCATTTAACGGTGAATACCCGCGGGGAGATAGAGATGAAAAGCAAGCAAGCGCTGAAAGCACTGTTTGCC GCGCCGTTGGCGAAGTAG
Upstream 100 bases:
>100_bases CGGAGAGGATGGCCGCTGGACCCTGGGGTAACCCCTTGATGTCTTGAGGTGATAGTACCATGGTGAAGCGATTCAGCAAA GAAGATATTGGAGAGGACAT
Downstream 100 bases:
>100_bases GGCGCGGCCGTGCGGGAGCGCGCTCAGCGCAGGTGGCTGAGCGTGGTGAGGGGGGTTAGGGCTGCCCCGGCTTTTACCAT CCCGGCCAGCGCGCGTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MDIERLISIMNEDVYQRLATAVELGKWPDGSRLSESQRGEALQMVMLYQSRHNHQAAHLTVNTRGEIEMKSKQALKALFA APLAK
Sequences:
>Translated_85_residues MDIERLISIMNEDVYQRLATAVELGKWPDGSRLSESQRGEALQMVMLYQSRHNHQAAHLTVNTRGEIEMKSKQALKALFA APLAK >Mature_85_residues MDIERLISIMNEDVYQRLATAVELGKWPDGSRLSESQRGEALQMVMLYQSRHNHQAAHLTVNTRGEIEMKSKQALKALFA APLAK
Specific function: Unknown
COG id: COG3139
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081972, Length=87, Percent_Identity=54.0229885057471, Blast_Score=100, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009749 [H]
Pfam domain/function: PF07023 DUF1315 [H]
EC number: NA
Molecular weight: Translated: 9623; Mature: 9623
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIERLISIMNEDVYQRLATAVELGKWPDGSRLSESQRGEALQMVMLYQSRHNHQAAHLT CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCEEEEE VNTRGEIEMKSKQALKALFAAPLAK ECCCCCEEHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDIERLISIMNEDVYQRLATAVELGKWPDGSRLSESQRGEALQMVMLYQSRHNHQAAHLT CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCEEEEE VNTRGEIEMKSKQALKALFAAPLAK ECCCCCEEHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]