| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is uspG [H]
Identifier: 238919531
GI number: 238919531
Start: 1586742
End: 1587173
Strand: Direct
Name: uspG [H]
Synonym: NT01EI_1627
Alternate gene names: 238919531
Gene position: 1586742-1587173 (Clockwise)
Preceding gene: 238919530
Following gene: 238919534
Centisome position: 41.62
GC content: 55.79
Gene sequence:
>432_bases ATGTATCAGAACATTTTACTACCGCTGGATCTGGGAGAAGAGGCGCTGACGGCGATGGCGTTGGATCAGGTGAAGGCCGT GATCCGCAGCCAGGATATCCGGGTGCGCCTGATGTACGTCGTCGCACAGATCCCCGATTTTATCCTCAACCGCTTTAATC CACAGACCAATCAGTTCGATGATGCGATTGGCGATGATCTGCGTTCGCGTCTACAGGCGTTGGCTGATACGCTGCCGCTT CCGGCGGAAAACATCAGCGTGGTGGTGCGTCAGGGCGGTATCTATGACGAAATTCTGAAAGAGGCACAGTGTATTGATGC CGACCTGATCCTGATCGGATCGCGGCGCCCCAGCATGAAAACCTATTTGCTGGGCTCCAATGCGGCAGCGATCGTTCGTC ACGCGCGTACCTCGGTGTTGGTCGCCCGTTAA
Upstream 100 bases:
>100_bases TGGTCACCTCACCTGATTTGTATGATGATTTGGCCCGCTGCTGCGCCGCCATGCTACGTATGCCGCGGGAATACCATCAC AGAACAGGAGGGGGGAACAG
Downstream 100 bases:
>100_bases GCGCCCCATCACACCCGACGGGAAAAGCAAAAGGCACCCTAGGGTGCCTTTTGACGTGGATGGTGGGCGTTAGCAACAAG CCTAGCGATTAAACAGCGAG
Product: universal stress protein family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MYQNILLPLDLGEEALTAMALDQVKAVIRSQDIRVRLMYVVAQIPDFILNRFNPQTNQFDDAIGDDLRSRLQALADTLPL PAENISVVVRQGGIYDEILKEAQCIDADLILIGSRRPSMKTYLLGSNAAAIVRHARTSVLVAR
Sequences:
>Translated_143_residues MYQNILLPLDLGEEALTAMALDQVKAVIRSQDIRVRLMYVVAQIPDFILNRFNPQTNQFDDAIGDDLRSRLQALADTLPL PAENISVVVRQGGIYDEILKEAQCIDADLILIGSRRPSMKTYLLGSNAAAIVRHARTSVLVAR >Mature_143_residues MYQNILLPLDLGEEALTAMALDQVKAVIRSQDIRVRLMYVVAQIPDFILNRFNPQTNQFDDAIGDDLRSRLQALADTLPL PAENISVVVRQGGIYDEILKEAQCIDADLILIGSRRPSMKTYLLGSNAAAIVRHARTSVLVAR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
Organism=Escherichia coli, GI87081893, Length=145, Percent_Identity=35.1724137931034, Blast_Score=90, Evalue=7e-20, Organism=Escherichia coli, GI1786824, Length=143, Percent_Identity=32.1678321678322, Blast_Score=89, Evalue=8e-20,
Paralogues:
None
Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 15890; Mature: 15890
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQNILLPLDLGEEALTAMALDQVKAVIRSQDIRVRLMYVVAQIPDFILNRFNPQTNQFD CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH DAIGDDLRSRLQALADTLPLPAENISVVVRQGGIYDEILKEAQCIDADLILIGSRRPSMK HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCE TYLLGSNAAAIVRHARTSVLVAR EEEECCCHHHHHHHHHHEEEECC >Mature Secondary Structure MYQNILLPLDLGEEALTAMALDQVKAVIRSQDIRVRLMYVVAQIPDFILNRFNPQTNQFD CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH DAIGDDLRSRLQALADTLPLPAENISVVVRQGGIYDEILKEAQCIDADLILIGSRRPSMK HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCE TYLLGSNAAAIVRHARTSVLVAR EEEECCCHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]