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The map label for this gene is yeaY [H]

Identifier: 238919522

GI number: 238919522

Start: 1578995

End: 1579582

Strand: Direct

Name: yeaY [H]

Synonym: NT01EI_1618

Alternate gene names: 238919522

Gene position: 1578995-1579582 (Clockwise)

Preceding gene: 238919520

Following gene: 238919523

Centisome position: 41.42

GC content: 62.93

Gene sequence:

>588_bases
ATGAAGTGCATCGCCGGGGTAGCCGCTGCGCTGCTGCTGGCCGGATGTGTGAGCGTACCGGAGTCGGTGCGTGGCACCTC
ACCGACGCCGCAGCAGAACTTTGTGGCGGTGCATAATGCGCCGGATTTATACGTCGGCCAGGAGTCCCGTTTCGGCGGCA
CGGTGGTCAGCGTCACCAACAAGAAAGAGGCCAGCTACCTGGAGATCGCCGTGATGCCGCTGGACAGCGGTGCCCGACCG
ATTTTGGGGCAGCCGGTACTGGGGCGCATTCTGGCCAAAAGCAGTGTCTTTCTTGACCCGATCAACTTTAATCGCCAGCT
GGTGACGGTGGTCGGACCGCTGACCGGCAGCGTAGAGGGAAAGATCGGCCAGACGCCCTATAACTTTGTCACCATGGATA
TCGGCGGCTATCAGCGCTGGCAGGTCGATCAGCAGGTGATTATGCCGCCGCAGCCGATTGGCCCCGGCCCCTGGGGCTAT
GATCCCTATTGGCGCCGTCATTACTGGGGGCCGGGCTTTGGCCCGGGCTGGGGCTGGTATGCTCCGATGCCGGCGCGGAT
TGAAAACGTCGTGGTGCCGCAGCCCTAG

Upstream 100 bases:

>100_bases
CGGCGGGTCAAAGAAGAGTGTAGGCGCCGCCAACGGCGGGCATATCTCGCCGTCGCTTTGGGCACGGTAGGTAAAGGGGA
GCGTAATGATGCGGATAAAG

Downstream 100 bases:

>100_bases
CGGCGCGGAGATTGCGCAAAGCCTGCGCGTTTGCGTGTTAAAAGCGGACAAAGTCGGGGGCGGCGGGCAGATTTTGGTGT
CATTGGCGCCCGTCAGGTAT

Product: outer membrane protein slp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKCIAGVAAALLLAGCVSVPESVRGTSPTPQQNFVAVHNAPDLYVGQESRFGGTVVSVTNKKEASYLEIAVMPLDSGARP
ILGQPVLGRILAKSSVFLDPINFNRQLVTVVGPLTGSVEGKIGQTPYNFVTMDIGGYQRWQVDQQVIMPPQPIGPGPWGY
DPYWRRHYWGPGFGPGWGWYAPMPARIENVVVPQP

Sequences:

>Translated_195_residues
MKCIAGVAAALLLAGCVSVPESVRGTSPTPQQNFVAVHNAPDLYVGQESRFGGTVVSVTNKKEASYLEIAVMPLDSGARP
ILGQPVLGRILAKSSVFLDPINFNRQLVTVVGPLTGSVEGKIGQTPYNFVTMDIGGYQRWQVDQQVIMPPQPIGPGPWGY
DPYWRRHYWGPGFGPGWGWYAPMPARIENVVVPQP
>Mature_195_residues
MKCIAGVAAALLLAGCVSVPESVRGTSPTPQQNFVAVHNAPDLYVGQESRFGGTVVSVTNKKEASYLEIAVMPLDSGARP
ILGQPVLGRILAKSSVFLDPINFNRQLVTVVGPLTGSVEGKIGQTPYNFVTMDIGGYQRWQVDQQVIMPPQPIGPGPWGY
DPYWRRHYWGPGFGPGWGWYAPMPARIENVVVPQP

Specific function: Unknown

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788108, Length=160, Percent_Identity=60, Blast_Score=197, Evalue=4e-52,
Organism=Escherichia coli, GI87082278, Length=189, Percent_Identity=39.1534391534392, Blast_Score=135, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 21131; Mature: 21131

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCIAGVAAALLLAGCVSVPESVRGTSPTPQQNFVAVHNAPDLYVGQESRFGGTVVSVTN
CCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEECCCCEEECCCCCCCCEEEEEEC
KKEASYLEIAVMPLDSGARPILGQPVLGRILAKSSVFLDPINFNRQLVTVVGPLTGSVEG
CCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCCCC
KIGQTPYNFVTMDIGGYQRWQVDQQVIMPPQPIGPGPWGYDPYWRRHYWGPGFGPGWGWY
CCCCCCCEEEEEECCCCEEEECCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
APMPARIENVVVPQP
CCCCCCCCEEECCCC
>Mature Secondary Structure
MKCIAGVAAALLLAGCVSVPESVRGTSPTPQQNFVAVHNAPDLYVGQESRFGGTVVSVTN
CCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEECCCCEEECCCCCCCCEEEEEEC
KKEASYLEIAVMPLDSGARPILGQPVLGRILAKSSVFLDPINFNRQLVTVVGPLTGSVEG
CCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCCCC
KIGQTPYNFVTMDIGGYQRWQVDQQVIMPPQPIGPGPWGYDPYWRRHYWGPGFGPGWGWY
CCCCCCCEEEEEECCCCEEEECCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
APMPARIENVVVPQP
CCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]