| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yeaZ [H]
Identifier: 238919520
GI number: 238919520
Start: 1578167
End: 1578868
Strand: Direct
Name: yeaZ [H]
Synonym: NT01EI_1617
Alternate gene names: 238919520
Gene position: 1578167-1578868 (Clockwise)
Preceding gene: 238919519
Following gene: 238919522
Centisome position: 41.4
GC content: 67.52
Gene sequence:
>702_bases ATGTCCACGCGAATTTTAGCGATTGATACCGCAACGGAAGCCTGTTCCGTTGCACTGTGGAATAACGGTGAGTCTCTGGC GCTGTTTGAGATCTGTCCACGCGAACACACCCAGCGTATCCTGCCGATGGTGCAGCAGATCCTGGCCGGGGCGGGGGTGA CGCTGGCCCAGCTGGATGCGCTGGCCTTTGGCCGCGGGCCGGGCAGCTTTACCGGTGTGCGTATCGGCGTGGGGATCGCC CAGGGACTGGCACTGGGTGCCGGGCTGCCGATGATCGGCGTCTCCACGCTGGCGACGATGGCGCAGGGCGCCTGGCGCTG TACGGCGGCGGGCCGGGTTGTGAGCGCGATCGATGCGCGCATGGGCGAGGTTTATTGGGGCGAGTACTGCCGCGATAGCG ACGGTGTCTGGCACGGCGGCGCCACCGAGGCGGTGCTTAATCCACAGCAGGCGGGCGCCCGTTTGGCCGCGCTGCAGGGG GAGTGGGCGATGGCCGGTACCGGCTGGCAGGCCTATCCCGATCTGGCGCAGGACGCGGGCCCAATGCTGCGCGACGGGCA AATGCTGCTGCCTCACGCCGAAGATATGCTGCCGCTGGCGCTGCACGCCTGGCAGGCGGGGGAGACGGTGGCGGTGGAGC AGGCGCAGCCGATCTACCTGCGCAATGAAGTGACCTGGAAGAAACTGCCGGGGCGCGGCTAA
Upstream 100 bases:
>100_bases GCGCCGGAGGAGGGAAAGGTGAATTGAGAAACACAGGGTTAAGGGGCTGTGTTATTATTCTGCCCATTGATAATTCATTT CTTTTCTTGCCGAGGTTGGC
Downstream 100 bases:
>100_bases CGCCTGCAGGGGAACCCGGCGCAGAACGGCGGGTCAAAGAAGAGTGTAGGCGCCGCCAACGGCGGGCATATCTCGCCGTC GCTTTGGGCACGGTAGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSTRILAIDTATEACSVALWNNGESLALFEICPREHTQRILPMVQQILAGAGVTLAQLDALAFGRGPGSFTGVRIGVGIA QGLALGAGLPMIGVSTLATMAQGAWRCTAAGRVVSAIDARMGEVYWGEYCRDSDGVWHGGATEAVLNPQQAGARLAALQG EWAMAGTGWQAYPDLAQDAGPMLRDGQMLLPHAEDMLPLALHAWQAGETVAVEQAQPIYLRNEVTWKKLPGRG
Sequences:
>Translated_233_residues MSTRILAIDTATEACSVALWNNGESLALFEICPREHTQRILPMVQQILAGAGVTLAQLDALAFGRGPGSFTGVRIGVGIA QGLALGAGLPMIGVSTLATMAQGAWRCTAAGRVVSAIDARMGEVYWGEYCRDSDGVWHGGATEAVLNPQQAGARLAALQG EWAMAGTGWQAYPDLAQDAGPMLRDGQMLLPHAEDMLPLALHAWQAGETVAVEQAQPIYLRNEVTWKKLPGRG >Mature_232_residues STRILAIDTATEACSVALWNNGESLALFEICPREHTQRILPMVQQILAGAGVTLAQLDALAFGRGPGSFTGVRIGVGIAQ GLALGAGLPMIGVSTLATMAQGAWRCTAAGRVVSAIDARMGEVYWGEYCRDSDGVWHGGATEAVLNPQQAGARLAALQGE WAMAGTGWQAYPDLAQDAGPMLRDGQMLLPHAEDMLPLALHAWQAGETVAVEQAQPIYLRNEVTWKKLPGRG
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=229, Percent_Identity=69.4323144104803, Blast_Score=332, Evalue=1e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 24620; Mature: 24488
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRILAIDTATEACSVALWNNGESLALFEICPREHTQRILPMVQQILAGAGVTLAQLDA CCCEEEEEECCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHH LAFGRGPGSFTGVRIGVGIAQGLALGAGLPMIGVSTLATMAQGAWRCTAAGRVVSAIDAR HHCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHH MGEVYWGEYCRDSDGVWHGGATEAVLNPQQAGARLAALQGEWAMAGTGWQAYPDLAQDAG HCHHHHHHHHCCCCCEECCCCCHHEECHHHHCCEEEEECCCEEEECCCCCCCCCHHHHCC PMLRDGQMLLPHAEDMLPLALHAWQAGETVAVEQAQPIYLRNEVTWKKLPGRG CCCCCCCEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCCEEECCCCCC >Mature Secondary Structure STRILAIDTATEACSVALWNNGESLALFEICPREHTQRILPMVQQILAGAGVTLAQLDA CCEEEEEECCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHH LAFGRGPGSFTGVRIGVGIAQGLALGAGLPMIGVSTLATMAQGAWRCTAAGRVVSAIDAR HHCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHH MGEVYWGEYCRDSDGVWHGGATEAVLNPQQAGARLAALQGEWAMAGTGWQAYPDLAQDAG HCHHHHHHHHCCCCCEECCCCCHHEECHHHHCCEEEEECCCEEEECCCCCCCCCHHHHCC PMLRDGQMLLPHAEDMLPLALHAWQAGETVAVEQAQPIYLRNEVTWKKLPGRG CCCCCCCEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]