| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is znuA [H]
Identifier: 238919506
GI number: 238919506
Start: 1562832
End: 1563836
Strand: Direct
Name: znuA [H]
Synonym: NT01EI_1602
Alternate gene names: 238919506
Gene position: 1562832-1563836 (Clockwise)
Preceding gene: 238919503
Following gene: 238919507
Centisome position: 40.99
GC content: 51.74
Gene sequence:
>1005_bases ATGATACCGCAAAAAAATATAATTAAGCGCACGCTTATTGCTTCCGCGCTGTCGCTGTGTGCGCTGGCGGGCAGTGCACA GGCTGACGTCGTGACCTCGGTTAGGCCGTTAGGTTTCATCGCGGCGGCGATTGCCGACGGGGTAATGCTGACGCATGTTC TGCTGCCTGACGGCGCCTCTCCCCATGATTATGCGCTGCGTCCCTCGGATATCAAACGATTGCACGATGCCAACCTGGTG GTATGGATAGGGCCTAAAATGGAGAGCTTTCTTGAAAAGCCGACTCAACAGCTAGAAAGTAATAAAAATCTCACTCTTGT CACCCTTCCTGGCGTACGTAGTCAACTCATTGTGGGTGATGATGATGATGAACACGGTCATCCTGCCGCACAGAGTGAGA GTCATGCGGAAAATTCTGATTTTTCCGGGGCACATATTGTTACAGAGGGCGTCAGCGCTGGTTTCGCGGGCGATAGTGAT CACGATCATGGTCAATACAATATGCATATCTGGCTCTCTCCGGCGATTGCAAAACAGGTGGCGATTGCGATTCATGACCG ATTAGTGCAACAAAGCCCACAAAATAAAGACAAACTGGATGTCAACCTACGTAAATTCGAGCAACAACTCGAGCAGACGG AAAAGAAAGTTGGTATCATGCTGCAGCCTGTGCAGGATAAAGGGTATTTTGTCTTTCATGATGCCTATGGTTACTTCGAG AAAGCCTTTGGCCTGACTCCATTGGGGCATTTCACGGTCAATCCCGAGATACAGCCTGGCGCACGGCGCTTACACCAAAT TCGAACACAGCTGGTTGAGCAAAAGGCGGTCTGCGTTTTTGCTGAGCCACAGTTCAGGCCAGCCGTTATCTCGGCGATTG CGCAGGGGACCCCTGTCCGGCAGGGTACGCTAGATCCCCTGGGAAGCGCGATCCCACTGAGTGCGGACAGCTATATGGTC TTTTTGACCACGCTGGCGCAGCAGTATTCAAGCTGCCTGAAGTGA
Upstream 100 bases:
>100_bases ACGGTAGATTATCTTGCTGTGACATGGTTACGGCATATTGCACTATAAGTTAAATGTTATAATATAACGTTCCATAAAAC GTTACCCGGAGATTTTTGTC
Downstream 100 bases:
>100_bases GATTAAGAGGAAAATCCGAGTGCAGCAGATAGCACGTTCTATCGCTCAGGCATACAGTAATTTGCCCCGCCCCCACCGGG TTATGCTGGGGTCCCTGAGC
Product: high-affinity zinc transporter periplasmic component
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MIPQKNIIKRTLIASALSLCALAGSAQADVVTSVRPLGFIAAAIADGVMLTHVLLPDGASPHDYALRPSDIKRLHDANLV VWIGPKMESFLEKPTQQLESNKNLTLVTLPGVRSQLIVGDDDDEHGHPAAQSESHAENSDFSGAHIVTEGVSAGFAGDSD HDHGQYNMHIWLSPAIAKQVAIAIHDRLVQQSPQNKDKLDVNLRKFEQQLEQTEKKVGIMLQPVQDKGYFVFHDAYGYFE KAFGLTPLGHFTVNPEIQPGARRLHQIRTQLVEQKAVCVFAEPQFRPAVISAIAQGTPVRQGTLDPLGSAIPLSADSYMV FLTTLAQQYSSCLK
Sequences:
>Translated_334_residues MIPQKNIIKRTLIASALSLCALAGSAQADVVTSVRPLGFIAAAIADGVMLTHVLLPDGASPHDYALRPSDIKRLHDANLV VWIGPKMESFLEKPTQQLESNKNLTLVTLPGVRSQLIVGDDDDEHGHPAAQSESHAENSDFSGAHIVTEGVSAGFAGDSD HDHGQYNMHIWLSPAIAKQVAIAIHDRLVQQSPQNKDKLDVNLRKFEQQLEQTEKKVGIMLQPVQDKGYFVFHDAYGYFE KAFGLTPLGHFTVNPEIQPGARRLHQIRTQLVEQKAVCVFAEPQFRPAVISAIAQGTPVRQGTLDPLGSAIPLSADSYMV FLTTLAQQYSSCLK >Mature_334_residues MIPQKNIIKRTLIASALSLCALAGSAQADVVTSVRPLGFIAAAIADGVMLTHVLLPDGASPHDYALRPSDIKRLHDANLV VWIGPKMESFLEKPTQQLESNKNLTLVTLPGVRSQLIVGDDDDEHGHPAAQSESHAENSDFSGAHIVTEGVSAGFAGDSD HDHGQYNMHIWLSPAIAKQVAIAIHDRLVQQSPQNKDKLDVNLRKFEQQLEQTEKKVGIMLQPVQDKGYFVFHDAYGYFE KAFGLTPLGHFTVNPEIQPGARRLHQIRTQLVEQKAVCVFAEPQFRPAVISAIAQGTPVRQGTLDPLGSAIPLSADSYMV FLTTLAQQYSSCLK
Specific function: Involved in the high-affinity zinc uptake transport system [H]
COG id: COG4531
COG function: function code P; ABC-type Zn2+ transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=310, Percent_Identity=58.3870967741935, Blast_Score=368, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 36452; Mature: 36452
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPQKNIIKRTLIASALSLCALAGSAQADVVTSVRPLGFIAAAIADGVMLTHVLLPDGAS CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCC PHDYALRPSDIKRLHDANLVVWIGPKMESFLEKPTQQLESNKNLTLVTLPGVRSQLIVGD CCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECC DDDEHGHPAAQSESHAENSDFSGAHIVTEGVSAGFAGDSDHDHGQYNMHIWLSPAIAKQV CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECHHHHHHH AIAIHDRLVQQSPQNKDKLDVNLRKFEQQLEQTEKKVGIMLQPVQDKGYFVFHDAYGYFE HHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEECCHHHHH KAFGLTPLGHFTVNPEIQPGARRLHQIRTQLVEQKAVCVFAEPQFRPAVISAIAQGTPVR HHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCC QGTLDPLGSAIPLSADSYMVFLTTLAQQYSSCLK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIPQKNIIKRTLIASALSLCALAGSAQADVVTSVRPLGFIAAAIADGVMLTHVLLPDGAS CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCC PHDYALRPSDIKRLHDANLVVWIGPKMESFLEKPTQQLESNKNLTLVTLPGVRSQLIVGD CCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECC DDDEHGHPAAQSESHAENSDFSGAHIVTEGVSAGFAGDSDHDHGQYNMHIWLSPAIAKQV CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECHHHHHHH AIAIHDRLVQQSPQNKDKLDVNLRKFEQQLEQTEKKVGIMLQPVQDKGYFVFHDAYGYFE HHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEECCHHHHH KAFGLTPLGHFTVNPEIQPGARRLHQIRTQLVEQKAVCVFAEPQFRPAVISAIAQGTPVR HHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCC QGTLDPLGSAIPLSADSYMVFLTTLAQQYSSCLK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]