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The map label for this gene is cmoA [H]

Identifier: 238919493

GI number: 238919493

Start: 1551520

End: 1552290

Strand: Reverse

Name: cmoA [H]

Synonym: NT01EI_1589

Alternate gene names: 238919493

Gene position: 1552290-1551520 (Counterclockwise)

Preceding gene: 238919495

Following gene: 238919492

Centisome position: 40.72

GC content: 61.35

Gene sequence:

>771_bases
ATGTCTGACTGCGATAAAAATCCCGCGCTGGGCGCCGGGCGCGATATGCTGTTTTCCGCCCCAATAGCCAAGCTGGGCGA
CTGGACCTTCGATGAGCGCGTGGCCGAAGTGTTTCCCGACATGATCCAGCGCTCGGTCCCCGGCTACTCCAATATCATCG
CCATGATCGGCATGCTGGCGCAGCGCTTCGTACAGCCGGGAACCCGGGTATACGATCTGGGCTGCTCCCTGGGCGCGGCG
ACGCTCTCCATGCGCCGTAACATCCAGGCCACAGGGTGCGAAATCATCGCCATCGACAACTCCCCGGCGATGGTCAGCCG
CTGCCGTCGTCATATCGACGCCTTCCGCAACCCGACCCCGGTGCAGGTGCTTGAGGCCGACATCCGTGAGGTCGACATTA
GCAACGCCTCGCTGGTGGTGCTCAACTTCACGCTGCAGTTCCTGGCCCCGGACGATCGTCAGCTCCTGCTGGATCGCATC
TATCGCGGTCTGCTGCCCGGCGGCGCACTCGTCCTGTCAGAAAAATTCAACTTCGCCGACGCCACCGTCGGCGAGCTGTT
GTTCGATATGCATCACGACTTCAAGCGCGCCAACGGCTACAGTGAGCTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAA
ACGTCATGCTGACAGACAGCGTAGAAACCCATAAGCAGCGCCTGCGCCAGGCGGGTTTCTGCCACGCCGAGACCTGGTTT
CAGTGCTTTAACTTCGGCTCGCTGCTGGCCATCAAGGAGGCTCAGCCATGA

Upstream 100 bases:

>100_bases
TGGCGGAGTGCGAGTGCGCACTGGACGAAATAGCACATAGCCGCCATAGGGCATTCTCTGCTAAAATATGCGCCCCTTAT
TGAAACTCCCTACATCCGCT

Downstream 100 bases:

>100_bases
TCGACTTTGGTAATTTCTATGCCCAAATAGCCCACGGCCCGCTGAGCAAATGGCTGGAGGTGCTGCCGGCACAGCTGGCA
GCCTGGCAGCGCGACTCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSDCDKNPALGAGRDMLFSAPIAKLGDWTFDERVAEVFPDMIQRSVPGYSNIIAMIGMLAQRFVQPGTRVYDLGCSLGAA
TLSMRRNIQATGCEIIAIDNSPAMVSRCRRHIDAFRNPTPVQVLEADIREVDISNASLVVLNFTLQFLAPDDRQLLLDRI
YRGLLPGGALVLSEKFNFADATVGELLFDMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKQRLRQAGFCHAETWF
QCFNFGSLLAIKEAQP

Sequences:

>Translated_256_residues
MSDCDKNPALGAGRDMLFSAPIAKLGDWTFDERVAEVFPDMIQRSVPGYSNIIAMIGMLAQRFVQPGTRVYDLGCSLGAA
TLSMRRNIQATGCEIIAIDNSPAMVSRCRRHIDAFRNPTPVQVLEADIREVDISNASLVVLNFTLQFLAPDDRQLLLDRI
YRGLLPGGALVLSEKFNFADATVGELLFDMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKQRLRQAGFCHAETWF
QCFNFGSLLAIKEAQP
>Mature_255_residues
SDCDKNPALGAGRDMLFSAPIAKLGDWTFDERVAEVFPDMIQRSVPGYSNIIAMIGMLAQRFVQPGTRVYDLGCSLGAAT
LSMRRNIQATGCEIIAIDNSPAMVSRCRRHIDAFRNPTPVQVLEADIREVDISNASLVVLNFTLQFLAPDDRQLLLDRIY
RGLLPGGALVLSEKFNFADATVGELLFDMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKQRLRQAGFCHAETWFQ
CFNFGSLLAIKEAQP

Specific function: Catalyzes the conversion of 5-methoxyuridine (mo5U) to uridine-5-oxyacetic acid (cmo5U) at position 34 in tRNA. May also participate in the methylation of uridine-5-oxyacetic acid (cmo5U) to uridine-5-oxyacetic acid methyl ester (mcmo5U) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoA family [H]

Homologues:

Organism=Escherichia coli, GI1788177, Length=239, Percent_Identity=82.0083682008368, Blast_Score=420, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR005271 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28606; Mature: 28475

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDCDKNPALGAGRDMLFSAPIAKLGDWTFDERVAEVFPDMIQRSVPGYSNIIAMIGMLA
CCCCCCCCCCCCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QRFVQPGTRVYDLGCSLGAATLSMRRNIQATGCEIIAIDNSPAMVSRCRRHIDAFRNPTP
HHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCC
VQVLEADIREVDISNASLVVLNFTLQFLAPDDRQLLLDRIYRGLLPGGALVLSEKFNFAD
HHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCH
ATVGELLFDMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKQRLRQAGFCHAETWF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH
QCFNFGSLLAIKEAQP
HHHCCCCEEEEECCCC
>Mature Secondary Structure 
SDCDKNPALGAGRDMLFSAPIAKLGDWTFDERVAEVFPDMIQRSVPGYSNIIAMIGMLA
CCCCCCCCCCCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QRFVQPGTRVYDLGCSLGAATLSMRRNIQATGCEIIAIDNSPAMVSRCRRHIDAFRNPTP
HHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCC
VQVLEADIREVDISNASLVVLNFTLQFLAPDDRQLLLDRIYRGLLPGGALVLSEKFNFAD
HHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCH
ATVGELLFDMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKQRLRQAGFCHAETWF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH
QCFNFGSLLAIKEAQP
HHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA