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The map label for this gene is cmoB

Identifier: 238919492

GI number: 238919492

Start: 1550552

End: 1551523

Strand: Reverse

Name: cmoB

Synonym: NT01EI_1588

Alternate gene names: 238919492

Gene position: 1551523-1550552 (Counterclockwise)

Preceding gene: 238919493

Following gene: 238919490

Centisome position: 40.7

GC content: 62.65

Gene sequence:

>972_bases
ATGATCGACTTTGGTAATTTCTATGCCCAAATAGCCCACGGCCCGCTGAGCAAATGGCTGGAGGTGCTGCCGGCACAGCT
GGCAGCCTGGCAGCGCGACTCACTGCACGGCTACTTTCGTGACTGGAATAATGCGGTAGAACGGCTGCCGGCCCTGACGC
CGCACCGTCTGGATCTGCTGCACGGGGTTTGCGCCGGGGCGGAGACCCCGCTGAGCGAGGGGCAGCGCATCGGCATTGAA
AAAATGCTGCGCACACTGATGCCCTGGCGTAAAGGCCCCTTCGAGCTGTATGGCATTCAGATCGATACCGAATGGCGTTC
AGACTGGAAATGGCAGCGCATTCTTCCGCACCTGTCGCCGCTGGCCGGGCGCACCATTCTCGACGTCGGCTGCGGCAGCG
GTTACCACCTGTGGCGTATGGTTGGCGCAGGGGCACACCTGGCAGTCGGCATCGATCCGATGCAGCTGTTTCTGTGCCAG
TTCGAGGCGGTGCGTAAGCTGCTCGGCGGCGATAGCCGCGCCCATCTGCTGCCGCTGGGGATCGAGCAGCTACCGGCGCT
GGCGGCCTTTGATACGGTATTCTCGATGGGCGTCCTCTATCACCGCCGCTCACCGCTGGATCATCTGTACCAGCTGAAGA
ACCAGCTGGTCAGCGGCGGTGAACTGCTGCTGGAGACCTTGGTTATTGAAGGCGATGAACAGCAGGCGCTGATCCCCGGC
GAGCGCTACGCGCAGATGCGTAACGTCTACTTTATCCCCTCTGCCGCCATGCTGATCCGCTGGCTGGAGAAGTGCGGCTT
CTGCGACGTCCGTCTGGTGGATCAGTGCCCCACCAGCGTAGAGGAGCAGCGGCGTACCGACTGGATGACCAGCGAATCCC
TGGCCGACTTCCTGGATCCGGCGGATGTGCGAAAAACCCTCGAAGGCTATCCGGCGCCGCTGCGCGCAGCCTTCATCGCC
CGCAAGCCCTGA

Upstream 100 bases:

>100_bases
CCCATAAGCAGCGCCTGCGCCAGGCGGGTTTCTGCCACGCCGAGACCTGGTTTCAGTGCTTTAACTTCGGCTCGCTGCTG
GCCATCAAGGAGGCTCAGCC

Downstream 100 bases:

>100_bases
GCTCCTGCGCCATAAAAAAGAGCCCCAACCGGCAAGGTGTGGGGCCGAACTTTTTAGCAAACCCTCCGCTACAAAGCCGT
ACTTACGTCTACTGGAGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MIDFGNFYAQIAHGPLSKWLEVLPAQLAAWQRDSLHGYFRDWNNAVERLPALTPHRLDLLHGVCAGAETPLSEGQRIGIE
KMLRTLMPWRKGPFELYGIQIDTEWRSDWKWQRILPHLSPLAGRTILDVGCGSGYHLWRMVGAGAHLAVGIDPMQLFLCQ
FEAVRKLLGGDSRAHLLPLGIEQLPALAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVSGGELLLETLVIEGDEQQALIPG
ERYAQMRNVYFIPSAAMLIRWLEKCGFCDVRLVDQCPTSVEEQRRTDWMTSESLADFLDPADVRKTLEGYPAPLRAAFIA
RKP

Sequences:

>Translated_323_residues
MIDFGNFYAQIAHGPLSKWLEVLPAQLAAWQRDSLHGYFRDWNNAVERLPALTPHRLDLLHGVCAGAETPLSEGQRIGIE
KMLRTLMPWRKGPFELYGIQIDTEWRSDWKWQRILPHLSPLAGRTILDVGCGSGYHLWRMVGAGAHLAVGIDPMQLFLCQ
FEAVRKLLGGDSRAHLLPLGIEQLPALAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVSGGELLLETLVIEGDEQQALIPG
ERYAQMRNVYFIPSAAMLIRWLEKCGFCDVRLVDQCPTSVEEQRRTDWMTSESLADFLDPADVRKTLEGYPAPLRAAFIA
RKP
>Mature_323_residues
MIDFGNFYAQIAHGPLSKWLEVLPAQLAAWQRDSLHGYFRDWNNAVERLPALTPHRLDLLHGVCAGAETPLSEGQRIGIE
KMLRTLMPWRKGPFELYGIQIDTEWRSDWKWQRILPHLSPLAGRTILDVGCGSGYHLWRMVGAGAHLAVGIDPMQLFLCQ
FEAVRKLLGGDSRAHLLPLGIEQLPALAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVSGGELLLETLVIEGDEQQALIPG
ERYAQMRNVYFIPSAAMLIRWLEKCGFCDVRLVDQCPTSVEEQRRTDWMTSESLADFLDPADVRKTLEGYPAPLRAAFIA
RKP

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family

Homologues:

Organism=Escherichia coli, GI1788178, Length=323, Percent_Identity=74.3034055727554, Blast_Score=508, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CMOB_EDWI9 (C5B836)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002933007.1
- ProteinModelPortal:   C5B836
- GeneID:   7961916
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_1588
- OMA:   DVIFCLG
- ProtClustDB:   PRK15068
- HAMAP:   MF_01590
- InterPro:   IPR010017
- TIGRFAMs:   TIGR00452

Pfam domain/function: PF08003 Methyltransf_9

EC number: NA

Molecular weight: Translated: 36570; Mature: 36570

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFGNFYAQIAHGPLSKWLEVLPAQLAAWQRDSLHGYFRDWNNAVERLPALTPHRLDLL
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
HGVCAGAETPLSEGQRIGIEKMLRTLMPWRKGPFELYGIQIDTEWRSDWKWQRILPHLSP
HHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHCH
LAGRTILDVGCGSGYHLWRMVGAGAHLAVGIDPMQLFLCQFEAVRKLLGGDSRAHLLPLG
HCCCEEEEECCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECC
IEQLPALAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVSGGELLLETLVIEGDEQQALIPG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
ERYAQMRNVYFIPSAAMLIRWLEKCGFCDVRLVDQCPTSVEEQRRTDWMTSESLADFLDP
HHHHHHCCEEECCHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHCCCHHHHHHHCCH
ADVRKTLEGYPAPLRAAFIARKP
HHHHHHHHCCCCHHHHHHHCCCC
>Mature Secondary Structure
MIDFGNFYAQIAHGPLSKWLEVLPAQLAAWQRDSLHGYFRDWNNAVERLPALTPHRLDLL
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
HGVCAGAETPLSEGQRIGIEKMLRTLMPWRKGPFELYGIQIDTEWRSDWKWQRILPHLSP
HHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHCH
LAGRTILDVGCGSGYHLWRMVGAGAHLAVGIDPMQLFLCQFEAVRKLLGGDSRAHLLPLG
HCCCEEEEECCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECC
IEQLPALAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVSGGELLLETLVIEGDEQQALIPG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
ERYAQMRNVYFIPSAAMLIRWLEKCGFCDVRLVDQCPTSVEEQRRTDWMTSESLADFLDP
HHHHHHCCEEECCHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHCCCHHHHHHHCCH
ADVRKTLEGYPAPLRAAFIARKP
HHHHHHHHCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA