Click here to switch to the map view.

The map label for this gene is yceH [C]

Identifier: 238919486

GI number: 238919486

Start: 1543265

End: 1543915

Strand: Direct

Name: yceH [C]

Synonym: NT01EI_1582

Alternate gene names: 238919486

Gene position: 1543265-1543915 (Clockwise)

Preceding gene: 238919485

Following gene: 238919487

Centisome position: 40.48

GC content: 61.44

Gene sequence:

>651_bases
ATGATTAAACATATTCTTTCCCCGCTGGAAGCACGCGTTATCGGCTGCTTTTTGGAAAAGCAGATCACGACGCCAGAGCA
GTATCCGCTGTCGCTCAACGCACTGACCACCGCCTGTAACCAGAAAACCAACCGTGAACCGGTACTGGAACTGAGCGAGA
GCGAGGTACAAAACGCGCTGGATCTGCTGATCCGTAAGCACCAGATCCGCAGCGTGAATGCACCGGGTAGCCGGGTGATG
AAGTACGAACATCGCTTCTGCAACTCTGAATTTGGCGATTTGCGCTTCAGTGCGGCGGAGGTTGCGCTGATGTGCAGCCT
GTTGTTGCGTGGTCCACAGACGCCGGGTGAGCTACGCACCCGTTGTAACCGTCTGTATGCTTTTGCCGATGTTACCGGGG
TGGAGCAGGCGCTCAATCGCCTGGCGGAGCGTGAGGATGAGCCGTTTGTGCAGCGCCTGGCGCGTGAGGCGGGGCGACGG
GAGAGCCGCTACGCGCATCTGTTCTGCGGCGACGTGGCGGCGGATGCATTACCGCCGGTGTCGTCCGCCGCGCCGGAGGG
GCTCGGTGAGCGGGTGGCCGCTCTGGAGGCCGATGTCGCCGCGCTGAGGCTGCAGTTGGCCCACCTGCTGGGCGATGCTC
AACCGTCGTAG

Upstream 100 bases:

>100_bases
GGAAATGGCAGGATCATGTCTTGACTGCCCTGACGGATCCCGAGTGGACCGCTGGGCGCTGACACCGCAGAATGGATGAA
TGTCCTGGAGATACTTCCAC

Downstream 100 bases:

>100_bases
CCGCGCTTCCGGCCGCGCCGTGCTGCATTAATCGTCCGACGGGCGGAGAACCCGCCTTTTATTACATCCTGCGCTGGCTA
TTCATCATGGGATAAGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MIKHILSPLEARVIGCFLEKQITTPEQYPLSLNALTTACNQKTNREPVLELSESEVQNALDLLIRKHQIRSVNAPGSRVM
KYEHRFCNSEFGDLRFSAAEVALMCSLLLRGPQTPGELRTRCNRLYAFADVTGVEQALNRLAEREDEPFVQRLAREAGRR
ESRYAHLFCGDVAADALPPVSSAAPEGLGERVAALEADVAALRLQLAHLLGDAQPS

Sequences:

>Translated_216_residues
MIKHILSPLEARVIGCFLEKQITTPEQYPLSLNALTTACNQKTNREPVLELSESEVQNALDLLIRKHQIRSVNAPGSRVM
KYEHRFCNSEFGDLRFSAAEVALMCSLLLRGPQTPGELRTRCNRLYAFADVTGVEQALNRLAEREDEPFVQRLAREAGRR
ESRYAHLFCGDVAADALPPVSSAAPEGLGERVAALEADVAALRLQLAHLLGDAQPS
>Mature_216_residues
MIKHILSPLEARVIGCFLEKQITTPEQYPLSLNALTTACNQKTNREPVLELSESEVQNALDLLIRKHQIRSVNAPGSRVM
KYEHRFCNSEFGDLRFSAAEVALMCSLLLRGPQTPGELRTRCNRLYAFADVTGVEQALNRLAEREDEPFVQRLAREAGRR
ESRYAHLFCGDVAADALPPVSSAAPEGLGERVAALEADVAALRLQLAHLLGDAQPS

Specific function: Unknown

COG id: COG3132

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0502 family [H]

Homologues:

Organism=Escherichia coli, GI1787306, Length=210, Percent_Identity=61.9047619047619, Blast_Score=261, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007432
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04337 DUF480 [H]

EC number: NA

Molecular weight: Translated: 23877; Mature: 23877

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKHILSPLEARVIGCFLEKQITTPEQYPLSLNALTTACNQKTNREPVLELSESEVQNAL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCHHHHHHHH
DLLIRKHQIRSVNAPGSRVMKYEHRFCNSEFGDLRFSAAEVALMCSLLLRGPQTPGELRT
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RCNRLYAFADVTGVEQALNRLAEREDEPFVQRLAREAGRRESRYAHLFCGDVAADALPPV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCHHHHCCHHHHHCCCCC
SSAAPEGLGERVAALEADVAALRLQLAHLLGDAQPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIKHILSPLEARVIGCFLEKQITTPEQYPLSLNALTTACNQKTNREPVLELSESEVQNAL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCHHHHHHHH
DLLIRKHQIRSVNAPGSRVMKYEHRFCNSEFGDLRFSAAEVALMCSLLLRGPQTPGELRT
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RCNRLYAFADVTGVEQALNRLAEREDEPFVQRLAREAGRRESRYAHLFCGDVAADALPPV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCHHHHCCHHHHHCCCCC
SSAAPEGLGERVAALEADVAALRLQLAHLLGDAQPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA