| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is mviN [H]
Identifier: 238919487
GI number: 238919487
Start: 1544020
End: 1545612
Strand: Direct
Name: mviN [H]
Synonym: NT01EI_1583
Alternate gene names: 238919487
Gene position: 1544020-1545612 (Clockwise)
Preceding gene: 238919486
Following gene: 238919489
Centisome position: 40.5
GC content: 60.45
Gene sequence:
>1593_bases TTGGCCTGTTTCCCCCGCCGTCAGCGGCGGGGCCGCAACCCTGACGATGAACTGATGAATTTACTTAAATCACTGGCTGC GGTCAGCTCAATGACCCTCTTTTCGCGTGTGCTGGGGTTTGCCCGTGACGCGCTGGTCGCCAGGATCTTTGGCGCCGGAA TGGCGACCGATGCCTTTTTTGTGGCCTTTAAGCTGCCCAACCTGCTACGGCGGATCTTTGCTGAGGGCGCCTTTTCCCAG GCCTTTGTGCCGATCCTGGCGGAGTATAAAAACCAGCAGGGCGAGCAGGCGACGCAGACTTTTATCGCCTACGTCAGCGG TCTACTGACCCTGATCCTGGCGCTGGTGACGCTGCTCGGCATGCTGGCGGCCCCCTGGGTTATCTATGCCACTGCGCCCG GCTTCGCCGATACGCCGGACAAGTTTGCGCTGACCAGCGCACTGCTGCGCATTACCTTTCCCTATATCTTGCTGATCTCC TTGGCCTCGATGGCTGGCGCGGTGCTGAATACCTGGAACCGTTTTTCGGTACCGGCCTTTGCGCCAACGCTGCTGAACGT CAGCATGATCGGCTTTGCGCTGTTTGTGGCGCCGTACTGCCATCCGCCGATCCTGGCGCTGGCCTGGGCCGTACTGATGG GCGGCGTGCTGCAACTGGGTTACCAGCTGCCGCACCTGAAGAAGATAGGTATGCTGGTGCTGCCGCGTCTCAATTTGCAC GATCGCGGGGTATGGCGGGTGCTCAAGCTGATGGGGCCGGCGATTGTCGGGGTTTCTGTCAGTCAGATCTCGCTGATTAT CAATACGATTTTTGCCTCCTTCCTGGTCTCTGGCTCCGTTTCCTGGATGTACTATGCCGACCGTCTGATGGAGCTGCCGT CGGGGGTATTGGGTGTTGCACTGGGGACTATCCTGCTGCCGTCGCTGGCCAAAAGCTTCTCATCTGGCCGCTTGGACGAC TATAACCGTCTGCTGGACTGGGGGCTGCGCCTCTGCTTTATGTTGGCGCTGCCCTGCGCCGTGGCGCTGGGAGTGATCGC GAAGCCGCTGACGGTGGCGCTGTTCCAGTATGGTAAATTCAGCGCCTTCGATGCGGCGATGACCCAGCGGGCACTGGTGG CCTACTCTATCGGTCTGCTCGGGATTATCATGGTGAAGATTCTGGCGCCGGGCTTTTACTCCCGTCAGGATATCAAGACA CCGGTGAAGATCGCCATCATCACGCTGATCCTGACCCAGGTGATGAACCTGATCTTTATCGGTCCCCTAAAGCATGCCGG GCTGTCGCTCTCCATCGGCCTGGCTGCCTGCCTGAATGCCGGCCTGCTGTACTGGCAGCTGCGGCGTCAGCGCCTGTTCA CCCCGCAAAAGGGGTGGCTGGAATTCCTGAGTAAGCTGGTGCTGGCGGTGCTGGTGATGACGGCAGTGCTGATTGGCATG ATGTGGCTGATGCCGGCGTGGGACACCGGAAATATGCCTTATCGGCTGCTGCGTCTGGCGGGGCTGGTGGTGGCCGGCGC GGTCAGCTACTTTGCGGTGCTGGCCCTGTTGGGGTTCCGCCTGCGCGACTTTACCCGCAGCGCGGTGCTGTAA
Upstream 100 bases:
>100_bases GCTTCCGGCCGCGCCGTGCTGCATTAATCGTCCGACGGGCGGAGAACCCGCCTTTTATTACATCCTGCGCTGGCTATTCA TCATGGGATAAGTAGACTAG
Downstream 100 bases:
>100_bases ACGCGGGGGCAGCTGCTGCCCCGCGATCGCGGTCATAAAAAAGCCACCTGCGGGGCAGGTGGCTTTTTGCTATCAATCGT CAGCCACCGCCGTCGGCGGT
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MACFPRRQRRGRNPDDELMNLLKSLAAVSSMTLFSRVLGFARDALVARIFGAGMATDAFFVAFKLPNLLRRIFAEGAFSQ AFVPILAEYKNQQGEQATQTFIAYVSGLLTLILALVTLLGMLAAPWVIYATAPGFADTPDKFALTSALLRITFPYILLIS LASMAGAVLNTWNRFSVPAFAPTLLNVSMIGFALFVAPYCHPPILALAWAVLMGGVLQLGYQLPHLKKIGMLVLPRLNLH DRGVWRVLKLMGPAIVGVSVSQISLIINTIFASFLVSGSVSWMYYADRLMELPSGVLGVALGTILLPSLAKSFSSGRLDD YNRLLDWGLRLCFMLALPCAVALGVIAKPLTVALFQYGKFSAFDAAMTQRALVAYSIGLLGIIMVKILAPGFYSRQDIKT PVKIAIITLILTQVMNLIFIGPLKHAGLSLSIGLAACLNAGLLYWQLRRQRLFTPQKGWLEFLSKLVLAVLVMTAVLIGM MWLMPAWDTGNMPYRLLRLAGLVVAGAVSYFAVLALLGFRLRDFTRSAVL
Sequences:
>Translated_530_residues MACFPRRQRRGRNPDDELMNLLKSLAAVSSMTLFSRVLGFARDALVARIFGAGMATDAFFVAFKLPNLLRRIFAEGAFSQ AFVPILAEYKNQQGEQATQTFIAYVSGLLTLILALVTLLGMLAAPWVIYATAPGFADTPDKFALTSALLRITFPYILLIS LASMAGAVLNTWNRFSVPAFAPTLLNVSMIGFALFVAPYCHPPILALAWAVLMGGVLQLGYQLPHLKKIGMLVLPRLNLH DRGVWRVLKLMGPAIVGVSVSQISLIINTIFASFLVSGSVSWMYYADRLMELPSGVLGVALGTILLPSLAKSFSSGRLDD YNRLLDWGLRLCFMLALPCAVALGVIAKPLTVALFQYGKFSAFDAAMTQRALVAYSIGLLGIIMVKILAPGFYSRQDIKT PVKIAIITLILTQVMNLIFIGPLKHAGLSLSIGLAACLNAGLLYWQLRRQRLFTPQKGWLEFLSKLVLAVLVMTAVLIGM MWLMPAWDTGNMPYRLLRLAGLVVAGAVSYFAVLALLGFRLRDFTRSAVL >Mature_529_residues ACFPRRQRRGRNPDDELMNLLKSLAAVSSMTLFSRVLGFARDALVARIFGAGMATDAFFVAFKLPNLLRRIFAEGAFSQA FVPILAEYKNQQGEQATQTFIAYVSGLLTLILALVTLLGMLAAPWVIYATAPGFADTPDKFALTSALLRITFPYILLISL ASMAGAVLNTWNRFSVPAFAPTLLNVSMIGFALFVAPYCHPPILALAWAVLMGGVLQLGYQLPHLKKIGMLVLPRLNLHD RGVWRVLKLMGPAIVGVSVSQISLIINTIFASFLVSGSVSWMYYADRLMELPSGVLGVALGTILLPSLAKSFSSGRLDDY NRLLDWGLRLCFMLALPCAVALGVIAKPLTVALFQYGKFSAFDAAMTQRALVAYSIGLLGIIMVKILAPGFYSRQDIKTP VKIAIITLILTQVMNLIFIGPLKHAGLSLSIGLAACLNAGLLYWQLRRQRLFTPQKGWLEFLSKLVLAVLVMTAVLIGMM WLMPAWDTGNMPYRLLRLAGLVVAGAVSYFAVLALLGFRLRDFTRSAVL
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=511, Percent_Identity=80.2348336594912, Blast_Score=825, Evalue=0.0,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 57906; Mature: 57775
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACFPRRQRRGRNPDDELMNLLKSLAAVSSMTLFSRVLGFARDALVARIFGAGMATDAFF CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VAFKLPNLLRRIFAEGAFSQAFVPILAEYKNQQGEQATQTFIAYVSGLLTLILALVTLLG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MLAAPWVIYATAPGFADTPDKFALTSALLRITFPYILLISLASMAGAVLNTWNRFSVPAF HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH APTLLNVSMIGFALFVAPYCHPPILALAWAVLMGGVLQLGYQLPHLKKIGMLVLPRLNLH HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCC DRGVWRVLKLMGPAIVGVSVSQISLIINTIFASFLVSGSVSWMYYADRLMELPSGVLGVA CHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH LGTILLPSLAKSFSSGRLDDYNRLLDWGLRLCFMLALPCAVALGVIAKPLTVALFQYGKF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SAFDAAMTQRALVAYSIGLLGIIMVKILAPGFYSRQDIKTPVKIAIITLILTQVMNLIFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH GPLKHAGLSLSIGLAACLNAGLLYWQLRRQRLFTPQKGWLEFLSKLVLAVLVMTAVLIGM CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MWLMPAWDTGNMPYRLLRLAGLVVAGAVSYFAVLALLGFRLRDFTRSAVL HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ACFPRRQRRGRNPDDELMNLLKSLAAVSSMTLFSRVLGFARDALVARIFGAGMATDAFF CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VAFKLPNLLRRIFAEGAFSQAFVPILAEYKNQQGEQATQTFIAYVSGLLTLILALVTLLG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MLAAPWVIYATAPGFADTPDKFALTSALLRITFPYILLISLASMAGAVLNTWNRFSVPAF HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH APTLLNVSMIGFALFVAPYCHPPILALAWAVLMGGVLQLGYQLPHLKKIGMLVLPRLNLH HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCC DRGVWRVLKLMGPAIVGVSVSQISLIINTIFASFLVSGSVSWMYYADRLMELPSGVLGVA CHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH LGTILLPSLAKSFSSGRLDDYNRLLDWGLRLCFMLALPCAVALGVIAKPLTVALFQYGKF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SAFDAAMTQRALVAYSIGLLGIIMVKILAPGFYSRQDIKTPVKIAIITLILTQVMNLIFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH GPLKHAGLSLSIGLAACLNAGLLYWQLRRQRLFTPQKGWLEFLSKLVLAVLVMTAVLIGM CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MWLMPAWDTGNMPYRLLRLAGLVVAGAVSYFAVLALLGFRLRDFTRSAVL HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]