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The map label for this gene is dtpA [H]

Identifier: 238919478

GI number: 238919478

Start: 1534552

End: 1536027

Strand: Direct

Name: dtpA [H]

Synonym: NT01EI_1574

Alternate gene names: 238919478

Gene position: 1534552-1536027 (Clockwise)

Preceding gene: 238919473

Following gene: 238919479

Centisome position: 40.25

GC content: 58.2

Gene sequence:

>1476_bases
GTGAGCGCTTCAACCCCTCCCTCTCACCAAGGCGCCGTCCCATCGGGAACCGGTGCGCTGTTTTTTATTCAAACGTTTGC
CACGCTCGGCTTTGCCGTGCTCTATTCCACCCTGGTGCTGTATGCCACGAAACGTCTTGGATTCAGCGAGACGCAGGCTA
ACGCCATGATGGGGATCTTTGGCGCCTTTAACTATGGCCTGCATCTGTTCGGCGGCTATTTGGGCGGGCGCTGTCTCAGT
AACCGTAACCTGTTTGTGCTGGGGATGGTGTTGCAGGTGATCGGCTGTTATCTGATCGCTGAGATGGGGGTGAGCGGCCT
GTATTGGGGACTGGCTATGTTTCTGACCGGCAGCGGGCTGAATGTGACCTGTATCAATATGATGTTGACCCAGCGTTTTG
CGCCGGACGATAACCGACGGGAAAGTGCGTTTTTATGGAACTATGCCGGGATGAATCTGGGCTTTTTCATCGGCTTTTCC
GTGGCGGGGTATTTCCAGCTGACGGAGAATTATCGGGCACTGTTCCTGTTTGCCACGCTGGGTAATGCGGTGGCGATCGT
AGTGACCCTGTCCCGCTGGCGTATTCTGGCCGACATCAATACACCACTGCGTCAGATACGCGGCCGCGCCTTCTATCGGC
GGATGCTGGTGGGGCTGCTGATCCTGGTGCTGCTGGTGCCGGTGCTGCGAATACTGCTGACTCACGCTGATTTCAGCAGC
AACTTTGTGATCCTGCTGGGGATCCTGGTTTTCGCGCTGCTGTGTGTAATGACGGCGCGTCACCGTCAGGCGGATGAGCG
TCGCCGCATGGTGGCCTACCTGATCCTGGCGCTGGGGTCGCTGGTATTCTGGTCGCTGTATCAGCTGGCGCCGATGGGGC
TGATGCTGTTCTCTGAACATAACATCGATCTGAACGTCTACGGCTGGCGGATCGCGCCCCAGTGGCTCCAGAATATCAAT
ACGCTGGTGATCGTCATTGGCGGTCCGTTGATGGCCTGGTTGTTTAAGTACCTGCGTGAGCTCGGTCTGCGTATCGATAT
CCCCTCTCAGTTTGCCGCCTCGCTGTTTTGTATGGGGCTGGGGATGCTGGTGTTGCCGTTGGGAATTTCGCTGGCCGGTG
CCAACGGGCTGGTCGCATTTAAATGGATCGCCATCAGCTATCTGCTGCAAAGCCTGGGAGAGCTGCTGATCTCGCCGATC
GGCTACGCCATGATAGGTAAGCTGGCTCCCGCCCGTCTGCAGGGGATGATGATGGGATGCTGGATGATGGTGACCGGGGT
CGCCTCCGTGCTGGCGGGCTATGTCTCCGGGCTGATGCCGCAAAACAGCGGCAATACGCCGCTGGAAACCAACCCGGGCT
ACAGCGCGGTGTTTAATGAACTGGGCTGGGGCTCTATCGCTACCGGGGTGATCCTGGTGCTGCTGGTGCCGCTGCTGCGC
CGGCTGATTGCCTATAGCAAGAGGTCAGCCACCTGA

Upstream 100 bases:

>100_bases
TACACAAACGGTATGGAACAACAACAAAGGCCGACCGGCACAACACCGGGAAGTTCTCAGGATGAGTCGTAACCAGCCCT
TTCGTTCAAGGAGAAAAGCG

Downstream 100 bases:

>100_bases
GCGATAGGCAATAGTGGCGCTTGACGTTGACAGACGGCGGAGATCCTGACAAAAGGGTATTCGCCGTTTTTTTATCCGCG
AGGCAAACGGTGGAGAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MSASTPPSHQGAVPSGTGALFFIQTFATLGFAVLYSTLVLYATKRLGFSETQANAMMGIFGAFNYGLHLFGGYLGGRCLS
NRNLFVLGMVLQVIGCYLIAEMGVSGLYWGLAMFLTGSGLNVTCINMMLTQRFAPDDNRRESAFLWNYAGMNLGFFIGFS
VAGYFQLTENYRALFLFATLGNAVAIVVTLSRWRILADINTPLRQIRGRAFYRRMLVGLLILVLLVPVLRILLTHADFSS
NFVILLGILVFALLCVMTARHRQADERRRMVAYLILALGSLVFWSLYQLAPMGLMLFSEHNIDLNVYGWRIAPQWLQNIN
TLVIVIGGPLMAWLFKYLRELGLRIDIPSQFAASLFCMGLGMLVLPLGISLAGANGLVAFKWIAISYLLQSLGELLISPI
GYAMIGKLAPARLQGMMMGCWMMVTGVASVLAGYVSGLMPQNSGNTPLETNPGYSAVFNELGWGSIATGVILVLLVPLLR
RLIAYSKRSAT

Sequences:

>Translated_491_residues
MSASTPPSHQGAVPSGTGALFFIQTFATLGFAVLYSTLVLYATKRLGFSETQANAMMGIFGAFNYGLHLFGGYLGGRCLS
NRNLFVLGMVLQVIGCYLIAEMGVSGLYWGLAMFLTGSGLNVTCINMMLTQRFAPDDNRRESAFLWNYAGMNLGFFIGFS
VAGYFQLTENYRALFLFATLGNAVAIVVTLSRWRILADINTPLRQIRGRAFYRRMLVGLLILVLLVPVLRILLTHADFSS
NFVILLGILVFALLCVMTARHRQADERRRMVAYLILALGSLVFWSLYQLAPMGLMLFSEHNIDLNVYGWRIAPQWLQNIN
TLVIVIGGPLMAWLFKYLRELGLRIDIPSQFAASLFCMGLGMLVLPLGISLAGANGLVAFKWIAISYLLQSLGELLISPI
GYAMIGKLAPARLQGMMMGCWMMVTGVASVLAGYVSGLMPQNSGNTPLETNPGYSAVFNELGWGSIATGVILVLLVPLLR
RLIAYSKRSAT
>Mature_490_residues
SASTPPSHQGAVPSGTGALFFIQTFATLGFAVLYSTLVLYATKRLGFSETQANAMMGIFGAFNYGLHLFGGYLGGRCLSN
RNLFVLGMVLQVIGCYLIAEMGVSGLYWGLAMFLTGSGLNVTCINMMLTQRFAPDDNRRESAFLWNYAGMNLGFFIGFSV
AGYFQLTENYRALFLFATLGNAVAIVVTLSRWRILADINTPLRQIRGRAFYRRMLVGLLILVLLVPVLRILLTHADFSSN
FVILLGILVFALLCVMTARHRQADERRRMVAYLILALGSLVFWSLYQLAPMGLMLFSEHNIDLNVYGWRIAPQWLQNINT
LVIVIGGPLMAWLFKYLRELGLRIDIPSQFAASLFCMGLGMLVLPLGISLAGANGLVAFKWIAISYLLQSLGELLISPIG
YAMIGKLAPARLQGMMMGCWMMVTGVASVLAGYVSGLMPQNSGNTPLETNPGYSAVFNELGWGSIATGVILVLLVPLLRR
LIAYSKRSAT

Specific function: Proton-dependent permease that transports di- and tripeptides [H]

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787922, Length=477, Percent_Identity=28.7211740041929, Blast_Score=199, Evalue=4e-52,
Organism=Escherichia coli, GI1789911, Length=478, Percent_Identity=29.4979079497908, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI1786927, Length=467, Percent_Identity=24.4111349036403, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1790572, Length=479, Percent_Identity=22.7557411273486, Blast_Score=118, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 53843; Mature: 53712

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASTPPSHQGAVPSGTGALFFIQTFATLGFAVLYSTLVLYATKRLGFSETQANAMMGIF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GAFNYGLHLFGGYLGGRCLSNRNLFVLGMVLQVIGCYLIAEMGVSGLYWGLAMFLTGSGL
HHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
NVTCINMMLTQRFAPDDNRRESAFLWNYAGMNLGFFIGFSVAGYFQLTENYRALFLFATL
CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHEEHHHHH
GNAVAIVVTLSRWRILADINTPLRQIRGRAFYRRMLVGLLILVLLVPVLRILLTHADFSS
CCHHEEEEEHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NFVILLGILVFALLCVMTARHRQADERRRMVAYLILALGSLVFWSLYQLAPMGLMLFSEH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
NIDLNVYGWRIAPQWLQNINTLVIVIGGPLMAWLFKYLRELGLRIDIPSQFAASLFCMGL
CCEEEEEEEEECHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHH
GMLVLPLGISLAGANGLVAFKWIAISYLLQSLGELLISPIGYAMIGKLAPARLQGMMMGC
HHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
WMMVTGVASVLAGYVSGLMPQNSGNTPLETNPGYSAVFNELGWGSIATGVILVLLVPLLR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
RLIAYSKRSAT
HHHHHHHCCCC
>Mature Secondary Structure 
SASTPPSHQGAVPSGTGALFFIQTFATLGFAVLYSTLVLYATKRLGFSETQANAMMGIF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GAFNYGLHLFGGYLGGRCLSNRNLFVLGMVLQVIGCYLIAEMGVSGLYWGLAMFLTGSGL
HHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
NVTCINMMLTQRFAPDDNRRESAFLWNYAGMNLGFFIGFSVAGYFQLTENYRALFLFATL
CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHEEHHHHH
GNAVAIVVTLSRWRILADINTPLRQIRGRAFYRRMLVGLLILVLLVPVLRILLTHADFSS
CCHHEEEEEHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NFVILLGILVFALLCVMTARHRQADERRRMVAYLILALGSLVFWSLYQLAPMGLMLFSEH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
NIDLNVYGWRIAPQWLQNINTLVIVIGGPLMAWLFKYLRELGLRIDIPSQFAASLFCMGL
CCEEEEEEEEECHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHH
GMLVLPLGISLAGANGLVAFKWIAISYLLQSLGELLISPIGYAMIGKLAPARLQGMMMGC
HHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
WMMVTGVASVLAGYVSGLMPQNSGNTPLETNPGYSAVFNELGWGSIATGVILVLLVPLLR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
RLIAYSKRSAT
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA