Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919458

Identifier: 238919458

GI number: 238919458

Start: 1515430

End: 1516638

Strand: Reverse

Name: 238919458

Synonym: NT01EI_1552

Alternate gene names: NA

Gene position: 1516638-1515430 (Counterclockwise)

Preceding gene: 238919459

Following gene: 238919457

Centisome position: 39.78

GC content: 53.76

Gene sequence:

>1209_bases
ATGAAGGCTCGTAAATTCCTTTATTACTCGTTACTGTCCGCAGGAGTTTCACTCCCGTCTGGAAGCGCGCATGGGGATAT
TTATTTACAGGATGTTTCATCCATTGACATTCCCCTTGAGTACAAAGAAAGAATAAAACAAGAAATTAGTTTAATAAAAA
ACACACAAAATAACAATGGATACCTTGCCACTGTAAAAAAAACAGAACACAAGATTCAGAGAGTTAAACACCCCGCAAAA
AACAGCACAAATAAACAGTTAACAACACGCGAAGCAGTTAAATATAATTTAAAAAAAGATAAAACACCTAATATTGATGA
TGCAAATAAATCATTAAACAGCACTCTTGTGCATCAAAACACATTGCTCGAAGCACAGAACCATACCCTGGCAAAAAAAC
TGAGTGCAGAGACGGATAAACGCAGCCAGCTGGAGCAGGCGCTGACCACAGCCCGGGCGCAGGCCTCGCAGGCACAGGCC
CAGCTGGCACCGTTGCAGGCCCGCAGCACCGAGCAGGAAAAACTCACCCGGGAGACCGCTGCCTTACAGCAGCGGCTGGA
TACGCTCACCACCCAAAACCATGCTCTGGAAAAAAACCTGAGTGCAGAGACGGATAAACGCAGCCAGCTGGAGCAGGCAC
TGACCACAGCCCGGGCGCAGGCCTCGCAGGCACAGGCCCAGCTGGCACCGTTGCAGGCCCGCAGCACCGAGCAGGAAAAA
CTCACCCGGGAGACCGCTGCCTTACAGCAGCGGCTGGATACGCTCACCACCCAAAACCACGCTCTGGAAAAAAACCTGAG
TGCAGAGACGGATAAACGCAGCCAGCTGGAGCAGGCACTGACCACAGCCCGGGCGCAGGCCTCGCAGGCACAGGCCCAGC
TGGCACCGTTGCAGGCCCGCAGCACCGAGCAGGAAAAACTCACCCGGGAGACCGCTGCCTTACAGCAGCGGCTGGATACG
CTCACCACCCAAAACCATGCTCTGGAAAAAAACCTGAGTGCAGAGACGGATAAACGCAGCCAGCTGGAGCAGGCGCTGAC
CACAGCCCGGGCACAGGCCTCGCAGGCACAGGCCAAGCTGGCACCGTTGCAGGCCCACAGCACCGAGCAGGAAAAACTCA
CCCGGGAGACCGCTGCCTTACAGCAGCGGCTGGATACGCTCACCACCCAACCATGCTCTGGAAAAAAACCTGAGTGCAGA
GACGGATAA

Upstream 100 bases:

>100_bases
TACTCATTGGATGCATCGTCGATTTTTAACAGCAGATAGTATTATTGCTCTTTTGGGCTATGCTTTGACCATAGCGTAGA
CTTCATATTGGGAGCATAGG

Downstream 100 bases:

>100_bases
ACGCAGCCAGCTGGAGCAGGCGCTGACCACAGCCCGGGCGCAGGCCTCGCAGGCACAGGCCCAGCTGGCACCGTTGCAGG
CCCGCAGCACCGAGCAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MKARKFLYYSLLSAGVSLPSGSAHGDIYLQDVSSIDIPLEYKERIKQEISLIKNTQNNNGYLATVKKTEHKIQRVKHPAK
NSTNKQLTTREAVKYNLKKDKTPNIDDANKSLNSTLVHQNTLLEAQNHTLAKKLSAETDKRSQLEQALTTARAQASQAQA
QLAPLQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEK
LTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEKLTRETAALQQRLDT
LTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAKLAPLQAHSTEQEKLTRETAALQQRLDTLTTQPCSGKKPECR
DG

Sequences:

>Translated_402_residues
MKARKFLYYSLLSAGVSLPSGSAHGDIYLQDVSSIDIPLEYKERIKQEISLIKNTQNNNGYLATVKKTEHKIQRVKHPAK
NSTNKQLTTREAVKYNLKKDKTPNIDDANKSLNSTLVHQNTLLEAQNHTLAKKLSAETDKRSQLEQALTTARAQASQAQA
QLAPLQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEK
LTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEKLTRETAALQQRLDT
LTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAKLAPLQAHSTEQEKLTRETAALQQRLDTLTTQPCSGKKPECR
DG
>Mature_402_residues
MKARKFLYYSLLSAGVSLPSGSAHGDIYLQDVSSIDIPLEYKERIKQEISLIKNTQNNNGYLATVKKTEHKIQRVKHPAK
NSTNKQLTTREAVKYNLKKDKTPNIDDANKSLNSTLVHQNTLLEAQNHTLAKKLSAETDKRSQLEQALTTARAQASQAQA
QLAPLQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEK
LTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEKLTRETAALQQRLDT
LTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAKLAPLQAHSTEQEKLTRETAALQQRLDTLTTQPCSGKKPECR
DG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44620; Mature: 44620

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARKFLYYSLLSAGVSLPSGSAHGDIYLQDVSSIDIPLEYKERIKQEISLIKNTQNNNG
CCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC
YLATVKKTEHKIQRVKHPAKNSTNKQLTTREAVKYNLKKDKTPNIDDANKSLNSTLVHQN
EEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
TLLEAQNHTLAKKLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEKLTRETA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEK
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
STEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
APLQAHSTEQEKLTRETAALQQRLDTLTTQPCSGKKPECRDG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKARKFLYYSLLSAGVSLPSGSAHGDIYLQDVSSIDIPLEYKERIKQEISLIKNTQNNNG
CCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC
YLATVKKTEHKIQRVKHPAKNSTNKQLTTREAVKYNLKKDKTPNIDDANKSLNSTLVHQN
EEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
TLLEAQNHTLAKKLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEKLTRETA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEK
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
STEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
APLQAHSTEQEKLTRETAALQQRLDTLTTQPCSGKKPECRDG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA