Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919457

Identifier: 238919457

GI number: 238919457

Start: 1514256

End: 1515356

Strand: Reverse

Name: 238919457

Synonym: NT01EI_1551

Alternate gene names: NA

Gene position: 1515356-1514256 (Counterclockwise)

Preceding gene: 238919458

Following gene: 238919454

Centisome position: 39.75

GC content: 46.87

Gene sequence:

>1101_bases
TTGCAGGCCCGCAGCACCGAGCAGGAAAAACTCACCCGGGAGACCGCTGCCTTACAGCAGCGGCTGGATACGCTCACCAC
CCAAAACCATGCTCTGGAAAAAAACCTGAGTGCAGAGACGGATAAACGCAGCCAGCTGGAGCAGGCGCTGACCACAGCCC
GGGCGCAGGCCTCGCAGGCACAGGCCCAGCTGGCACCGTTGCAGGCCCGCAGCACCGAGCAGGAAAAACTCACCCGGGAG
ACCGCTGCCTTACAGCAGCGGCTGGATACGCTCACCACCCAAAACCACGCTCTGGAAAAAAACCTGAGTGCAGAGACGGA
TAAACGCAGCCAGCTGGAGCAGGCACTGACCACAGCCCGGGCGCAGGCCTCGCAGGCACAGGCCCAGCTGGCTAAATTAG
ATGCATCGGTCAAGTCTCAAGGCAAACACCCAGGAACATGGGCTGATATAAATAATTTATTTTCCGGATTTTCTCAAAGG
GAGATCTTATCATCAATTGACAACAAGCATTCATATGTTATTGGTTTGGCCTTATCTGACGAGATAAAAAATAAACAAAA
AGAAATGAAAAACATCGGGTTAAATTTGGAGGATAGTTTCTTTTTGGCAGGGCTGATTCATGGATACTTCAACACCTCAA
GCTTACCCAAAAATAAAGAGATAGAAATCCAGCAAGGGATATCTAAAACAATCACAGATAATATCAACCGAAACCTTGAA
ATGTCCGTACTGAAAATAAAAAAAGAAGTATCAGGAAAAAAGATACTTCCCGCCAGCACTGATAAATTCGTTTTCACCCT
TGATAAAGAGGGAAGTCACGGATACAAACGAGGCAATACCGTTACATACAACGTAACCGAGATGAAGCTGAATGGTGAGC
TAATAAGAAGCAGCACCAACAATAAAGTTACTTACAACACTGAAACCCCCGACTATATGCGAATTGCAATCAAGGAAGCC
AAAAAAGGTGGTGAAATTTCCGTATATGGCTTGGCCATTAATATTTATGGCAACAACATCCCGCCGGGGATTTTTGCGGA
CACCCCCGTCAAACTACAATTCAATTTAGAGCCTATATCAATAGGAGATCATTCCAAATAA

Upstream 100 bases:

>100_bases
AAAAAACCTGAGTGCAGAGACGGATAAACGCAGCCAGCTGGAGCAGGCGCTGACCACAGCCCGGGCGCAGGCCTCGCAGG
CACAGGCCCAGCTGGCACCG

Downstream 100 bases:

>100_bases
TAAACCCCTACTCCAGCAACAATATATTGCTGGGTGATGCCTCCAATGAGTATAACATGTTTTTTTCGATAAAAGCTCCG
ATGACTTTTTCGTGGTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEKLTRE
TAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAKLDASVKSQGKHPGTWADINNLFSGFSQR
EILSSIDNKHSYVIGLALSDEIKNKQKEMKNIGLNLEDSFFLAGLIHGYFNTSSLPKNKEIEIQQGISKTITDNINRNLE
MSVLKIKKEVSGKKILPASTDKFVFTLDKEGSHGYKRGNTVTYNVTEMKLNGELIRSSTNNKVTYNTETPDYMRIAIKEA
KKGGEISVYGLAINIYGNNIPPGIFADTPVKLQFNLEPISIGDHSK

Sequences:

>Translated_366_residues
MQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEKLTRE
TAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAKLDASVKSQGKHPGTWADINNLFSGFSQR
EILSSIDNKHSYVIGLALSDEIKNKQKEMKNIGLNLEDSFFLAGLIHGYFNTSSLPKNKEIEIQQGISKTITDNINRNLE
MSVLKIKKEVSGKKILPASTDKFVFTLDKEGSHGYKRGNTVTYNVTEMKLNGELIRSSTNNKVTYNTETPDYMRIAIKEA
KKGGEISVYGLAINIYGNNIPPGIFADTPVKLQFNLEPISIGDHSK
>Mature_366_residues
MQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEKLTRE
TAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAKLDASVKSQGKHPGTWADINNLFSGFSQR
EILSSIDNKHSYVIGLALSDEIKNKQKEMKNIGLNLEDSFFLAGLIHGYFNTSSLPKNKEIEIQQGISKTITDNINRNLE
MSVLKIKKEVSGKKILPASTDKFVFTLDKEGSHGYKRGNTVTYNVTEMKLNGELIRSSTNNKVTYNTETPDYMRIAIKEA
KKGGEISVYGLAINIYGNNIPPGIFADTPVKLQFNLEPISIGDHSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40619; Mature: 40619

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
QAQLAPLQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTAR
HHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHH
AQASQAQAQLAKLDASVKSQGKHPGTWADINNLFSGFSQREILSSIDNKHSYVIGLALSD
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECH
EIKNKQKEMKNIGLNLEDSFFLAGLIHGYFNTSSLPKNKEIEIQQGISKTITDNINRNLE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHCCCCCC
MSVLKIKKEVSGKKILPASTDKFVFTLDKEGSHGYKRGNTVTYNVTEMKLNGELIRSSTN
HHHHHHHHHCCCCEECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCHHEECCCC
NKVTYNTETPDYMRIAIKEAKKGGEISVYGLAINIYGNNIPPGIFADTPVKLQFNLEPIS
CEEEECCCCCHHHHHEEHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEC
IGDHSK
CCCCCC
>Mature Secondary Structure
MQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
QAQLAPLQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTAR
HHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHH
AQASQAQAQLAKLDASVKSQGKHPGTWADINNLFSGFSQREILSSIDNKHSYVIGLALSD
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECH
EIKNKQKEMKNIGLNLEDSFFLAGLIHGYFNTSSLPKNKEIEIQQGISKTITDNINRNLE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHCCCCCC
MSVLKIKKEVSGKKILPASTDKFVFTLDKEGSHGYKRGNTVTYNVTEMKLNGELIRSSTN
HHHHHHHHHCCCCEECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCHHEECCCC
NKVTYNTETPDYMRIAIKEAKKGGEISVYGLAINIYGNNIPPGIFADTPVKLQFNLEPIS
CEEEECCCCCHHHHHEEHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEC
IGDHSK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA