Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238919452

Identifier: 238919452

GI number: 238919452

Start: 1511831

End: 1512292

Strand: Direct

Name: 238919452

Synonym: NT01EI_1546

Alternate gene names: NA

Gene position: 1511831-1512292 (Clockwise)

Preceding gene: 238919449

Following gene: 238919455

Centisome position: 39.66

GC content: 38.74

Gene sequence:

>462_bases
ATGGCTCGAACTCATGTACTGGCGGTATCTGATTTACATGTATTGATGTTATGGTTTTATCGGGCCAGAGAAAGCAATGA
ATATTCTGGTTATGAACATCGTTTAATCTTGAGTGCCATTGATATTATTGAGAGAGAGATAAACTCTTTCACCAGCGAGA
GAGATGCATTAGCTGAAGGTAATGCTTTATTTGATGAGATCAAGTTTACCGCCAGGGCCATCGAGGCAATAAAGAAAATA
ATGCCGGAGGTTATTTATCGGCGTGCAATGCAAGCGGTGAGAAATGGTAAAAGAAAAGAGAAAGTATCTCAAGAATCATC
AAGTTATGCCTGTATGTCTTGTAAGTTAACCAAAGATGCAATTTTATATTTGCGAACGGCAGCCAAAAGGACAGGCAGAA
CATACTCGGATATTGTTATTGATTGTTTGAGTGCGTGTTATAAGCTGGATGAGCGTAATTAA

Upstream 100 bases:

>100_bases
TAATCGTGTGTTACACCTAGGCGTGACCGACTGAGGTAACAATGTCAGTTTTGTCATACAGGCGAATATCATTAGGTTTA
CTCGCTGGAGGGCCAATATC

Downstream 100 bases:

>100_bases
ATAGGCCCTACATTATGCAACTCTTTTGGTACATGCATAATGTAGGGCATTCTTTTATTTGTCTACACTTTGCAGTACGC
CTTTCTCAAGTTCACTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MARTHVLAVSDLHVLMLWFYRARESNEYSGYEHRLILSAIDIIEREINSFTSERDALAEGNALFDEIKFTARAIEAIKKI
MPEVIYRRAMQAVRNGKRKEKVSQESSSYACMSCKLTKDAILYLRTAAKRTGRTYSDIVIDCLSACYKLDERN

Sequences:

>Translated_153_residues
MARTHVLAVSDLHVLMLWFYRARESNEYSGYEHRLILSAIDIIEREINSFTSERDALAEGNALFDEIKFTARAIEAIKKI
MPEVIYRRAMQAVRNGKRKEKVSQESSSYACMSCKLTKDAILYLRTAAKRTGRTYSDIVIDCLSACYKLDERN
>Mature_152_residues
ARTHVLAVSDLHVLMLWFYRARESNEYSGYEHRLILSAIDIIEREINSFTSERDALAEGNALFDEIKFTARAIEAIKKIM
PEVIYRRAMQAVRNGKRKEKVSQESSSYACMSCKLTKDAILYLRTAAKRTGRTYSDIVIDCLSACYKLDERN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17639; Mature: 17507

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTHVLAVSDLHVLMLWFYRARESNEYSGYEHRLILSAIDIIEREINSFTSERDALAEG
CCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NALFDEIKFTARAIEAIKKIMPEVIYRRAMQAVRNGKRKEKVSQESSSYACMSCKLTKDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEHHEEHHHHHH
ILYLRTAAKRTGRTYSDIVIDCLSACYKLDERN
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARTHVLAVSDLHVLMLWFYRARESNEYSGYEHRLILSAIDIIEREINSFTSERDALAEG
CCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NALFDEIKFTARAIEAIKKIMPEVIYRRAMQAVRNGKRKEKVSQESSSYACMSCKLTKDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEHHEEHHHHHH
ILYLRTAAKRTGRTYSDIVIDCLSACYKLDERN
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA