Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919435

Identifier: 238919435

GI number: 238919435

Start: 1493685

End: 1494821

Strand: Direct

Name: 238919435

Synonym: NT01EI_1529

Alternate gene names: NA

Gene position: 1493685-1494821 (Clockwise)

Preceding gene: 238919434

Following gene: 238919438

Centisome position: 39.18

GC content: 48.81

Gene sequence:

>1137_bases
ATGTATTGCGTAATAGGGGAAAGGCTGCTGCGTTATCTGATGTATGGCGTTTTAGCGCTGTCGTTGATGGCAAAAAGCCA
TGCTATCGGGGTGAATCTCACCATTTATAATAATCAGGAGATACGGATTGACTCTGGAGACTCTCCAGAGATCCTGAGCG
ACGGTGTGCTGCAAGTTAAGGATAATTACCCTGAGTTATCGGGGTTTGTTCTGTCGGATCTCGGCTCAAACCGAAGCAAC
TTGGTGCGCAGAACCAGCCTGTTCAGCGTCACCCTGACCGGGGCGCGCTACGGCAGGTCGATAACCCTGCGGGCCAAGCT
GGGTAAGACGATCTACCGACATGACTCTTATTTACGAGCCATTATCGTAGGAAATACCAGTGAGAATAATGGGTGTGCCA
ATATCCAGCCGCGGGATACAAAAAATCTACTGCAGGGCTCCGGTCAATTTATTTTTATTGACCCGGGCAGCCATGATTTT
ACGGCGGACTGTAGCGCAAAGACCCTTTCTGGTATTTATAGGGATATCGATATTCGTCCTGTGTTTACCTTTGGGGATGC
CAGAGTGGTATGGCTGGATATCGATACCCTGACAGCCAGTGATGCCTGGCAATCGCTGCCGCCTGATATTTATAACGGTA
GCGTCAGTTTAAATCTGGAGTACATGAGTAATATCAGTACTGGCAGAATTAAAGATCTAAATACCACCACCACCGTCTCG
ATACGCAAGCAGGCCTATTTTAGCGGGCTATCCGTGCCCTCAACCAATGTGGCATTCAACACGAGCTATACCCAGGACCA
GGTGGTAGGCTACGCCTCCACACCGCTGATTTTACAGGGCTTATTCGATCCTAACTTTGGCCGGATACGCTTTAGCCTGC
GCTCTGATAATCAGTTCTCCCTGGGTAATGCTGATGGCAGAAAGATATCTTATCAGGCAGTATTGAACCATGGGACACGG
CAGTATCCCTTAAATAAGGATGCGGCCGGTACGGCGCCCATCGAGATAGCCAGTTTAAACAACATCAATCAAATTCCTTT
GAACCTGACCTTTCAATTTAATCAGGATAAAGCCCGGCTGACGAGCGGTACCTATCGCGACAGAGTTGTTTTGCTTGCCG
AGCTACCGCTATTCTAG

Upstream 100 bases:

>100_bases
CGATCGTCTGCAGCGGGCAGGTTACCCTGCTGGTGAGCGTGCCGCTCTGAGAGGTATCGCGGCCCTGAGCCGGCGGTGTG
ATGTTATGTCAGGAGGAAGT

Downstream 100 bases:

>100_bases
GCGGCCAGAATGGCACGCTGCCAATCTCCCGCGCGTGCTGTCAGACCCCGGTGGAATGGGTTATCAGCCCTCATCATGGG
GGCGCTCACTGCGTTATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MYCVIGERLLRYLMYGVLALSLMAKSHAIGVNLTIYNNQEIRIDSGDSPEILSDGVLQVKDNYPELSGFVLSDLGSNRSN
LVRRTSLFSVTLTGARYGRSITLRAKLGKTIYRHDSYLRAIIVGNTSENNGCANIQPRDTKNLLQGSGQFIFIDPGSHDF
TADCSAKTLSGIYRDIDIRPVFTFGDARVVWLDIDTLTASDAWQSLPPDIYNGSVSLNLEYMSNISTGRIKDLNTTTTVS
IRKQAYFSGLSVPSTNVAFNTSYTQDQVVGYASTPLILQGLFDPNFGRIRFSLRSDNQFSLGNADGRKISYQAVLNHGTR
QYPLNKDAAGTAPIEIASLNNINQIPLNLTFQFNQDKARLTSGTYRDRVVLLAELPLF

Sequences:

>Translated_378_residues
MYCVIGERLLRYLMYGVLALSLMAKSHAIGVNLTIYNNQEIRIDSGDSPEILSDGVLQVKDNYPELSGFVLSDLGSNRSN
LVRRTSLFSVTLTGARYGRSITLRAKLGKTIYRHDSYLRAIIVGNTSENNGCANIQPRDTKNLLQGSGQFIFIDPGSHDF
TADCSAKTLSGIYRDIDIRPVFTFGDARVVWLDIDTLTASDAWQSLPPDIYNGSVSLNLEYMSNISTGRIKDLNTTTTVS
IRKQAYFSGLSVPSTNVAFNTSYTQDQVVGYASTPLILQGLFDPNFGRIRFSLRSDNQFSLGNADGRKISYQAVLNHGTR
QYPLNKDAAGTAPIEIASLNNINQIPLNLTFQFNQDKARLTSGTYRDRVVLLAELPLF
>Mature_378_residues
MYCVIGERLLRYLMYGVLALSLMAKSHAIGVNLTIYNNQEIRIDSGDSPEILSDGVLQVKDNYPELSGFVLSDLGSNRSN
LVRRTSLFSVTLTGARYGRSITLRAKLGKTIYRHDSYLRAIIVGNTSENNGCANIQPRDTKNLLQGSGQFIFIDPGSHDF
TADCSAKTLSGIYRDIDIRPVFTFGDARVVWLDIDTLTASDAWQSLPPDIYNGSVSLNLEYMSNISTGRIKDLNTTTTVS
IRKQAYFSGLSVPSTNVAFNTSYTQDQVVGYASTPLILQGLFDPNFGRIRFSLRSDNQFSLGNADGRKISYQAVLNHGTR
QYPLNKDAAGTAPIEIASLNNINQIPLNLTFQFNQDKARLTSGTYRDRVVLLAELPLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41831; Mature: 41831

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCVIGERLLRYLMYGVLALSLMAKSHAIGVNLTIYNNQEIRIDSGDSPEILSDGVLQVK
CEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEECCCCCCCHHCCCEEEEE
DNYPELSGFVLSDLGSNRSNLVRRTSLFSVTLTGARYGRSITLRAKLGKTIYRHDSYLRA
CCCCCCCCEEEECCCCCHHHHEEEEEEEEEEEECCCCCCEEEEEEHHCCHHHCCCCEEEE
IIVGNTSENNGCANIQPRDTKNLLQGSGQFIFIDPGSHDFTADCSAKTLSGIYRDIDIRP
EEEECCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCEEE
VFTFGDARVVWLDIDTLTASDAWQSLPPDIYNGSVSLNLEYMSNISTGRIKDLNTTTTVS
EEEECCCEEEEEEEEECCCCCHHHHCCCCHHCCEEEEEEEECCCCCCCCEEECCCEEEEE
IRKQAYFSGLSVPSTNVAFNTSYTQDQVVGYASTPLILQGLFDPNFGRIRFSLRSDNQFS
EEHHHHHCCCCCCCCCEEEECCCCHHHEEEECCCCEEEEECCCCCCCEEEEEEECCCEEE
LGNADGRKISYQAVLNHGTRQYPLNKDAAGTAPIEIASLNNINQIPLNLTFQFNQDKARL
CCCCCCCEEEEEEHCCCCCEECCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCEE
TSGTYRDRVVLLAELPLF
CCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MYCVIGERLLRYLMYGVLALSLMAKSHAIGVNLTIYNNQEIRIDSGDSPEILSDGVLQVK
CEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEECCCCCCCHHCCCEEEEE
DNYPELSGFVLSDLGSNRSNLVRRTSLFSVTLTGARYGRSITLRAKLGKTIYRHDSYLRA
CCCCCCCCEEEECCCCCHHHHEEEEEEEEEEEECCCCCCEEEEEEHHCCHHHCCCCEEEE
IIVGNTSENNGCANIQPRDTKNLLQGSGQFIFIDPGSHDFTADCSAKTLSGIYRDIDIRP
EEEECCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCEEE
VFTFGDARVVWLDIDTLTASDAWQSLPPDIYNGSVSLNLEYMSNISTGRIKDLNTTTTVS
EEEECCCEEEEEEEEECCCCCHHHHCCCCHHCCEEEEEEEECCCCCCCCEEECCCEEEEE
IRKQAYFSGLSVPSTNVAFNTSYTQDQVVGYASTPLILQGLFDPNFGRIRFSLRSDNQFS
EEHHHHHCCCCCCCCCEEEECCCCHHHEEEECCCCEEEEECCCCCCCEEEEEEECCCEEE
LGNADGRKISYQAVLNHGTRQYPLNKDAAGTAPIEIASLNNINQIPLNLTFQFNQDKARL
CCCCCCCEEEEEEHCCCCCEECCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCEE
TSGTYRDRVVLLAELPLF
CCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA