Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238919434

Identifier: 238919434

GI number: 238919434

Start: 1493014

End: 1493634

Strand: Direct

Name: 238919434

Synonym: NT01EI_1528

Alternate gene names: NA

Gene position: 1493014-1493634 (Clockwise)

Preceding gene: 238919433

Following gene: 238919435

Centisome position: 39.16

GC content: 63.77

Gene sequence:

>621_bases
GTGAATAAACGTCAGGTAAGCGTGGGGATTGGGTTAAGTCTCGGGCTGTGGCTGAGCGGCGCGGCGCAGGGCTTTGTCGT
GAGCAATGGCGGCCATACGCTGGAGGAGAGCCTGGAGCTGAGCGCGCACATCGATATGGGCAGCCATGTGGTGCAGCCGG
TGCAGCTGATAAGTCAGACGCCCCTGGTTCAGCAGGTGGCGTATGACGCGCGGCGCCATCGTTTTGAGGATATGGGTATC
GCCCTGCGGGCGATAGGCGAACAGAACAGCCAGCCGCTGCTGCTGGAGATCGTGAACGACCAGTACCAGTGTGCGTCCCT
CTCCCAGGTGTTGTACACGCCGTTTACGCTGGCGGCCGTCAACCAGGGATATCGCTACGGCGTCGAAACAGGGGGGCGGT
CGGTTGCCCGGCTGGATAGCTCTGGCCCCCGCCAGCACCGTTTTGAGCCGGGAGAGTGGCAGCGCGCGGGGGATGTGGCG
GGTATCACGGCAAACCGCTTTACTCTGGACTTCTATCTCCGCGTGGTCCTGCCGGAACTCTCGCAGGTTCCCGTGGGCGG
AGTGGGGGTGCCGATCGTCTGCAGCGGGCAGGTTACCCTGCTGGTGAGCGTGCCGCTCTGA

Upstream 100 bases:

>100_bases
ACCGGGGCGATTACCCTGCTGTCTGAGGGGCGGCCATGCGCCTCGCTCTCTTCGGCGCTGCAGCTGCCGGCCGATCAACT
ACCCATCGTGGAGTGTAAGA

Downstream 100 bases:

>100_bases
GAGGTATCGCGGCCCTGAGCCGGCGGTGTGATGTTATGTCAGGAGGAAGTATGTATTGCGTAATAGGGGAAAGGCTGCTG
CGTTATCTGATGTATGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNKRQVSVGIGLSLGLWLSGAAQGFVVSNGGHTLEESLELSAHIDMGSHVVQPVQLISQTPLVQQVAYDARRHRFEDMGI
ALRAIGEQNSQPLLLEIVNDQYQCASLSQVLYTPFTLAAVNQGYRYGVETGGRSVARLDSSGPRQHRFEPGEWQRAGDVA
GITANRFTLDFYLRVVLPELSQVPVGGVGVPIVCSGQVTLLVSVPL

Sequences:

>Translated_206_residues
MNKRQVSVGIGLSLGLWLSGAAQGFVVSNGGHTLEESLELSAHIDMGSHVVQPVQLISQTPLVQQVAYDARRHRFEDMGI
ALRAIGEQNSQPLLLEIVNDQYQCASLSQVLYTPFTLAAVNQGYRYGVETGGRSVARLDSSGPRQHRFEPGEWQRAGDVA
GITANRFTLDFYLRVVLPELSQVPVGGVGVPIVCSGQVTLLVSVPL
>Mature_206_residues
MNKRQVSVGIGLSLGLWLSGAAQGFVVSNGGHTLEESLELSAHIDMGSHVVQPVQLISQTPLVQQVAYDARRHRFEDMGI
ALRAIGEQNSQPLLLEIVNDQYQCASLSQVLYTPFTLAAVNQGYRYGVETGGRSVARLDSSGPRQHRFEPGEWQRAGDVA
GITANRFTLDFYLRVVLPELSQVPVGGVGVPIVCSGQVTLLVSVPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22267; Mature: 22267

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRQVSVGIGLSLGLWLSGAAQGFVVSNGGHTLEESLELSAHIDMGSHVVQPVQLISQT
CCCEEEEEECCEEEEEEECCCCCEEEEECCCCCHHHHEEEEEEECCCHHHHHHHHHHHCC
PLVQQVAYDARRHRFEDMGIALRAIGEQNSQPLLLEIVNDQYQCASLSQVLYTPFTLAAV
CHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEC
NQGYRYGVETGGRSVARLDSSGPRQHRFEPGEWQRAGDVAGITANRFTLDFYLRVVLPEL
CCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHH
SQVPVGGVGVPIVCSGQVTLLVSVPL
HCCCCCCCCCCEEECCCEEEEEEECC
>Mature Secondary Structure
MNKRQVSVGIGLSLGLWLSGAAQGFVVSNGGHTLEESLELSAHIDMGSHVVQPVQLISQT
CCCEEEEEECCEEEEEEECCCCCEEEEECCCCCHHHHEEEEEEECCCHHHHHHHHHHHCC
PLVQQVAYDARRHRFEDMGIALRAIGEQNSQPLLLEIVNDQYQCASLSQVLYTPFTLAAV
CHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEC
NQGYRYGVETGGRSVARLDSSGPRQHRFEPGEWQRAGDVAGITANRFTLDFYLRVVLPEL
CCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHH
SQVPVGGVGVPIVCSGQVTLLVSVPL
HCCCCCCCCCCEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA