| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is insA [H]
Identifier: 238919413
GI number: 238919413
Start: 1477031
End: 1477303
Strand: Direct
Name: insA [H]
Synonym: NT01EI_1507
Alternate gene names: 238919413
Gene position: 1477031-1477303 (Clockwise)
Preceding gene: 238919411
Following gene: 238919414
Centisome position: 38.74
GC content: 51.65
Gene sequence:
>273_bases ATGGCCAGCGTTAACGTTCATTGTCCCCGTTATCAGTCTGCTCAGGTTTACCGCCATGATCAGAATCCTAAAGGCCATGA CCGGTTTCGCTGCCGTGACTGCCACCGCGTCTTTCAGCTTACTTACGCCAATGAAGCCCGTAAACCGGGTATTAAAGAGC AGATCACTGAAATGGCCTTCAAGGGTGCCGGGGGACGCGATACCGCCAGAACACTGAAATTTGCCATTAACACCGTCATC CGGACGTTAAAAAACGCGCGCCAAAGCGAATAA
Upstream 100 bases:
>100_bases AGTGATGTCGGAGATATCCAGCTTGCGGCAGACATCCGGTACGGCTAATTTCTCTAGTTGTTTGAATCTAATATATAATA CTCGCTTTTGAGGTTCTTCC
Downstream 100 bases:
>100_bases CGTCTTCACTTGTCGCCCATACTGATGTGGCGCTTATCTGCGAACTCAATGAGCAATGAAGCTTCGTGGACAATAAAGCC CGGCAGCACTGGCTCTGGTA
Product: insertion element iso-IS1N protein InsA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MASVNVHCPRYQSAQVYRHDQNPKGHDRFRCRDCHRVFQLTYANEARKPGIKEQITEMAFKGAGGRDTARTLKFAINTVI RTLKNARQSE
Sequences:
>Translated_90_residues MASVNVHCPRYQSAQVYRHDQNPKGHDRFRCRDCHRVFQLTYANEARKPGIKEQITEMAFKGAGGRDTARTLKFAINTVI RTLKNARQSE >Mature_89_residues ASVNVHCPRYQSAQVYRHDQNPKGHDRFRCRDCHRVFQLTYANEARKPGIKEQITEMAFKGAGGRDTARTLKFAINTVIR TLKNARQSE
Specific function: Absolutely required for transposition of IS1 [H]
COG id: COG3677
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS1 elements insA family [H]
Homologues:
Organism=Escherichia coli, GI1789852, Length=90, Percent_Identity=37.7777777777778, Blast_Score=75, Evalue=1e-15, Organism=Escherichia coli, GI1788204, Length=90, Percent_Identity=37.7777777777778, Blast_Score=75, Evalue=1e-15, Organism=Escherichia coli, GI1786204, Length=90, Percent_Identity=37.7777777777778, Blast_Score=75, Evalue=1e-15, Organism=Escherichia coli, GI87081814, Length=90, Percent_Identity=37.7777777777778, Blast_Score=74, Evalue=3e-15, Organism=Escherichia coli, GI1786471, Length=90, Percent_Identity=37.7777777777778, Blast_Score=74, Evalue=3e-15, Organism=Escherichia coli, GI1786460, Length=90, Percent_Identity=37.7777777777778, Blast_Score=74, Evalue=3e-15, Organism=Escherichia coli, GI1790747, Length=90, Percent_Identity=36.6666666666667, Blast_Score=73, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003220 [H]
Pfam domain/function: PF03811 Ins_element1 [H]
EC number: NA
Molecular weight: Translated: 10392; Mature: 10261
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVNVHCPRYQSAQVYRHDQNPKGHDRFRCRDCHRVFQLTYANEARKPGIKEQITEMAF CCCCCCCCCCCCCCHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KGAGGRDTARTLKFAINTVIRTLKNARQSE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASVNVHCPRYQSAQVYRHDQNPKGHDRFRCRDCHRVFQLTYANEARKPGIKEQITEMAF CCCCCCCCCCCCCHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KGAGGRDTARTLKFAINTVIRTLKNARQSE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6265806 [H]