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The map label for this gene is insB [H]

Identifier: 238919414

GI number: 238919414

Start: 1477369

End: 1477590

Strand: Direct

Name: insB [H]

Synonym: NT01EI_1508

Alternate gene names: 238919414

Gene position: 1477369-1477590 (Clockwise)

Preceding gene: 238919413

Following gene: 238919416

Centisome position: 38.75

GC content: 56.31

Gene sequence:

>222_bases
GTGGACAATAAAGCCCGGCAGCACTGGCTCTGGTACGCGTACAACACCAAAACAGGCGGTGTACTGGCCTACACTTTTGG
TCTCAGAACCGATGAAAGCTGCCGGGAGCGACTGGCACTGTTCACGCCATGCAACATTGGCATGATCACCCGCGACGAGC
GGGGCCGCGATGGCCGGGAGGTGCCGAAGGATAATCATCTGACCGGCAAAATATTTACCTAA

Upstream 100 bases:

>100_bases
TCCGGACGTTAAAAAACGCGCGCCAAAGCGAATAACGTCTTCACTTGTCGCCCATACTGATGTGGCGCTTATCTGCGAAC
TCAATGAGCAATGAAGCTTC

Downstream 100 bases:

>100_bases
CGCATTGAACGTAATGACCTGACGCTCCGCACCCGTATTAAGAGCCGCTAACAAAACCGTTCAACAAAACGCAAGCAGAT
AACAGCACAAGCCAGCGTCA

Product: iso-IS1 ORF2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MDNKARQHWLWYAYNTKTGGVLAYTFGLRTDESCRERLALFTPCNIGMITRDERGRDGREVPKDNHLTGKIFT

Sequences:

>Translated_73_residues
MDNKARQHWLWYAYNTKTGGVLAYTFGLRTDESCRERLALFTPCNIGMITRDERGRDGREVPKDNHLTGKIFT
>Mature_73_residues
MDNKARQHWLWYAYNTKTGGVLAYTFGLRTDESCRERLALFTPCNIGMITRDERGRDGREVPKDNHLTGKIFT

Specific function: Absolutely required for transposition of IS1 [H]

COG id: COG1662

COG function: function code L; Transposase and inactivated derivatives, IS1 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 27 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005063 [H]

Pfam domain/function: PF03400 Transposase_27 [H]

EC number: NA

Molecular weight: Translated: 8494; Mature: 8494

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKARQHWLWYAYNTKTGGVLAYTFGLRTDESCRERLALFTPCNIGMITRDERGRDGRE
CCCCCCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHEEECCCCCCCEEECCCCCCCCCC
VPKDNHLTGKIFT
CCCCCCEEEEEEC
>Mature Secondary Structure
MDNKARQHWLWYAYNTKTGGVLAYTFGLRTDESCRERLALFTPCNIGMITRDERGRDGRE
CCCCCCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHEEECCCCCCCEEECCCCCCCCCC
VPKDNHLTGKIFT
CCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6265806 [H]