Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919386

Identifier: 238919386

GI number: 238919386

Start: 1454397

End: 1455134

Strand: Direct

Name: 238919386

Synonym: NT01EI_1480

Alternate gene names: NA

Gene position: 1454397-1455134 (Clockwise)

Preceding gene: 238919385

Following gene: 238919387

Centisome position: 38.15

GC content: 60.7

Gene sequence:

>738_bases
ATGACGTTATTGCCGGAAGGATTGGCCGCTTTTTTGACCGGCTGGCAGCAGGCCAGGACTCCGGACTTATTTCCCGCACG
GGCGCTTTGCCCACCGCCGTCGCCGGGCGGGCTGAACACATTTTTTACCCACTGGAAACAGCATCAGCCACTGGCTGTAC
AACATGCGCTGTTTTTTGATCCCTGGGCGGTGGCCGGAGTGGCCCGTAAAGAGGTGCCAACCACGGCAGTTCTGGCCTGG
CTGCTTAATCCTCAGGGCAGCCACGGTTTTGGCGGCATCATGCTCAGTGCCCTGATGAGCCACCTTTCCCGGCAATCCGC
GGGTCGGATACCGGCCAGCTATGGCCGCTATTGTCACACCAGTGTGGAGGATTGCCCGACGGGGGACAGCCGTAACCGGG
TGGATTTGGTGCTGGATAGCGAGAGATGCTATCTGCTGGTGGAGGTGAAGATTAGTGCGCCGGAGCAGGAGGAACAATTG
CAGCGGTATGCCCAGGAGGCCAGTGCCCGCGCCGGGAGCCGCGCCTGGGCCGTGCTGTTTTTAACCCCCGGGGGTTGCGC
CGGGCACTCACAGGGGGGAGATGATACGGCCTATCTGAACCTGTCATGGCGGCAGCTGTCATCCCTGTTGGTGCCGGTAT
TGGATGCCTATCAGGGCACTGCTGCCCATAAATCCCCCCAGCGTCACATGGCCGAGCAATCGGCCGCCTGTTTTATCCGC
CGTATGGCATCTCTTTAA

Upstream 100 bases:

>100_bases
TTTACCCGATGCCGGCTGAGACCGGGAACCCATGGTCCACAACACCGCGCGGGCATAAAGCGTGCGCGGGTGACAGGTGT
GAGTGAGGAGAATGCAGAAG

Downstream 100 bases:

>100_bases
GGATTTTGGAATGGAAAACGATCGTCAGGCTGGCGCATTGCTGCTGTCACAGCTGAAATTGGTCAATGAAGCTACGGTAT
ATTTCGAAACGGTAATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTLLPEGLAAFLTGWQQARTPDLFPARALCPPPSPGGLNTFFTHWKQHQPLAVQHALFFDPWAVAGVARKEVPTTAVLAW
LLNPQGSHGFGGIMLSALMSHLSRQSAGRIPASYGRYCHTSVEDCPTGDSRNRVDLVLDSERCYLLVEVKISAPEQEEQL
QRYAQEASARAGSRAWAVLFLTPGGCAGHSQGGDDTAYLNLSWRQLSSLLVPVLDAYQGTAAHKSPQRHMAEQSAACFIR
RMASL

Sequences:

>Translated_245_residues
MTLLPEGLAAFLTGWQQARTPDLFPARALCPPPSPGGLNTFFTHWKQHQPLAVQHALFFDPWAVAGVARKEVPTTAVLAW
LLNPQGSHGFGGIMLSALMSHLSRQSAGRIPASYGRYCHTSVEDCPTGDSRNRVDLVLDSERCYLLVEVKISAPEQEEQL
QRYAQEASARAGSRAWAVLFLTPGGCAGHSQGGDDTAYLNLSWRQLSSLLVPVLDAYQGTAAHKSPQRHMAEQSAACFIR
RMASL
>Mature_244_residues
TLLPEGLAAFLTGWQQARTPDLFPARALCPPPSPGGLNTFFTHWKQHQPLAVQHALFFDPWAVAGVARKEVPTTAVLAWL
LNPQGSHGFGGIMLSALMSHLSRQSAGRIPASYGRYCHTSVEDCPTGDSRNRVDLVLDSERCYLLVEVKISAPEQEEQLQ
RYAQEASARAGSRAWAVLFLTPGGCAGHSQGGDDTAYLNLSWRQLSSLLVPVLDAYQGTAAHKSPQRHMAEQSAACFIRR
MASL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26710; Mature: 26578

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLPEGLAAFLTGWQQARTPDLFPARALCPPPSPGGLNTFFTHWKQHQPLAVQHALFFD
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCC
PWAVAGVARKEVPTTAVLAWLLNPQGSHGFGGIMLSALMSHLSRQSAGRIPASYGRYCHT
CHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCC
SVEDCPTGDSRNRVDLVLDSERCYLLVEVKISAPEQEEQLQRYAQEASARAGSRAWAVLF
CCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEE
LTPGGCAGHSQGGDDTAYLNLSWRQLSSLLVPVLDAYQGTAAHKSPQRHMAEQSAACFIR
ECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RMASL
HHHCC
>Mature Secondary Structure 
TLLPEGLAAFLTGWQQARTPDLFPARALCPPPSPGGLNTFFTHWKQHQPLAVQHALFFD
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCC
PWAVAGVARKEVPTTAVLAWLLNPQGSHGFGGIMLSALMSHLSRQSAGRIPASYGRYCHT
CHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCC
SVEDCPTGDSRNRVDLVLDSERCYLLVEVKISAPEQEEQLQRYAQEASARAGSRAWAVLF
CCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEE
LTPGGCAGHSQGGDDTAYLNLSWRQLSSLLVPVLDAYQGTAAHKSPQRHMAEQSAACFIR
ECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RMASL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA