Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919387

Identifier: 238919387

GI number: 238919387

Start: 1455145

End: 1455792

Strand: Direct

Name: 238919387

Synonym: NT01EI_1481

Alternate gene names: NA

Gene position: 1455145-1455792 (Clockwise)

Preceding gene: 238919386

Following gene: 238919388

Centisome position: 38.17

GC content: 50.46

Gene sequence:

>648_bases
ATGGAAAACGATCGTCAGGCTGGCGCATTGCTGCTGTCACAGCTGAAATTGGTCAATGAAGCTACGGTATATTTCGAAAC
GGTAATTTATCCGGCTGTTTATAAGGGAATCTATACCTGTATCAATGATTTTGTCCGGGAGTCTGGATGGATTGGGGAAA
TCAGCGCCTATGAGGATAATGAAGACTACCTGTGGCTGGCTCCGCGAAAATGGAAATGTACAGAGCAGCAGGACAATAAC
TGTAAGCAGTGGTTTGAAAGTGTAGAGACTGAGAATAATGAAGATGACTATACCCTTGCCGTGATGACCGGCGTGGCGGT
ACAACCGGGGGAATGGGGATTTAAAACCTGTCTGAATATGGGAGAGTTCGGCGGCAGCCGTAAAGCCGGGGCAGCGATTA
AGTGCATTGACAGTGATTACATCCGCCGTCTGGAAAAACTGGGTTTCCGCCCGCTGAATAAAGGGGAGTTCTTTTTACCG
GTGAAGCTGGATCTGGAATTATTGAGAGCGGCCTGGGTGGCGCACGGGGCGTTCTCGGCTCAGGATGATGCCTTTGCTCC
ACTACGTAGCGCCTTGATAACCCTGCAGGCTGCCATCCCCATTCTGGATGAGTTTATCGAGGCACTGGCAAGCCAGACCG
CATCGTGA

Upstream 100 bases:

>100_bases
TATCAGGGCACTGCTGCCCATAAATCCCCCCAGCGTCACATGGCCGAGCAATCGGCCGCCTGTTTTATCCGCCGTATGGC
ATCTCTTTAAGGATTTTGGA

Downstream 100 bases:

>100_bases
TCTGACCCGGTACGGGCACTGTGAGGGGAGCTGATATCAGCTCCCTTTATATTTTAAAAAGTGATATGTTTATATTTTTT
AATCTTCCATTTACGGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MENDRQAGALLLSQLKLVNEATVYFETVIYPAVYKGIYTCINDFVRESGWIGEISAYEDNEDYLWLAPRKWKCTEQQDNN
CKQWFESVETENNEDDYTLAVMTGVAVQPGEWGFKTCLNMGEFGGSRKAGAAIKCIDSDYIRRLEKLGFRPLNKGEFFLP
VKLDLELLRAAWVAHGAFSAQDDAFAPLRSALITLQAAIPILDEFIEALASQTAS

Sequences:

>Translated_215_residues
MENDRQAGALLLSQLKLVNEATVYFETVIYPAVYKGIYTCINDFVRESGWIGEISAYEDNEDYLWLAPRKWKCTEQQDNN
CKQWFESVETENNEDDYTLAVMTGVAVQPGEWGFKTCLNMGEFGGSRKAGAAIKCIDSDYIRRLEKLGFRPLNKGEFFLP
VKLDLELLRAAWVAHGAFSAQDDAFAPLRSALITLQAAIPILDEFIEALASQTAS
>Mature_215_residues
MENDRQAGALLLSQLKLVNEATVYFETVIYPAVYKGIYTCINDFVRESGWIGEISAYEDNEDYLWLAPRKWKCTEQQDNN
CKQWFESVETENNEDDYTLAVMTGVAVQPGEWGFKTCLNMGEFGGSRKAGAAIKCIDSDYIRRLEKLGFRPLNKGEFFLP
VKLDLELLRAAWVAHGAFSAQDDAFAPLRSALITLQAAIPILDEFIEALASQTAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24170; Mature: 24170

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENDRQAGALLLSQLKLVNEATVYFETVIYPAVYKGIYTCINDFVRESGWIGEISAYEDN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEECC
EDYLWLAPRKWKCTEQQDNNCKQWFESVETENNEDDYTLAVMTGVAVQPGEWGFKTCLNM
CCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCEECCCCCHHHHHHHH
GEFGGSRKAGAAIKCIDSDYIRRLEKLGFRPLNKGEFFLPVKLDLELLRAAWVAHGAFSA
HHCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCC
QDDAFAPLRSALITLQAAIPILDEFIEALASQTAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENDRQAGALLLSQLKLVNEATVYFETVIYPAVYKGIYTCINDFVRESGWIGEISAYEDN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEECC
EDYLWLAPRKWKCTEQQDNNCKQWFESVETENNEDDYTLAVMTGVAVQPGEWGFKTCLNM
CCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCEECCCCCHHHHHHHH
GEFGGSRKAGAAIKCIDSDYIRRLEKLGFRPLNKGEFFLPVKLDLELLRAAWVAHGAFSA
HHCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCC
QDDAFAPLRSALITLQAAIPILDEFIEALASQTAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA