Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919346

Identifier: 238919346

GI number: 238919346

Start: 1416156

End: 1417391

Strand: Direct

Name: 238919346

Synonym: NT01EI_1440

Alternate gene names: NA

Gene position: 1416156-1417391 (Clockwise)

Preceding gene: 238919345

Following gene: 238919349

Centisome position: 37.15

GC content: 53.88

Gene sequence:

>1236_bases
TTGCCTGATTTTGATATGTTCAATCCAACATCAAAAGCAGGTTACTTTATGAACGAAAAACAGTTGCAGGCTCTGGCTAA
CGAACTGGCCAAAAATCTCAAAACCCCTGACGATCTCAGTCAGTTCGATCGCCTGCTGAAGAAAATCAGTGTTGAGGCGG
CTCTCAACGCCGAAATGTCCCACCATCTGGGCTACGGTAAAAATCAGCCTAAACCGGGTGCCAACTCCCGCAATGGCTAT
TCCACAAAGACCGTTACCACCGGTGATGGCCCTCTGGAACTACGCACGCCGCGTGATCGTGATGGCTCTTTCGAACCGCA
ACTGGTGAAGAAAAACCAGACCCGGATCACCGGTATGGATAACCAGATTTTATCGTTGTACGCCAAAGGGATGACCACCC
GCGAGATAGCGGCCGCGTTCAAAGAGCTGTATGACGCTGATGTCTCACCGGCGCTGGTCTCGAAGGTCACCGACGCCGTA
ATGGAGCAGGTTACCGAATGGCAGAATCGTCCACTGGATGCAGTCTATCCCATTGTTTACCTTGACTGTATCGTCCTGAA
GGTCCGGCAGGACAGTCGCGTCATTAATAAATCCGTGTTCCTTGCCCTGGGTATCAACCTCGAAGGCCAGAAAGAACTGC
TGGGTATGTGGCTGGCCGAAAACGAAGGCGCGAAGTTCTGGCTCAATGTGCTGACAGAGCTGAAGAATCGCGGCCTGAAC
GATATCCTCATCGCCTGTGTCGATGGTCTGAAAGGCTTCCCGGACGCGATCAATACGGTGTATCCGGAAGCCCGCATCCA
GCTGTGCATCGTGCATATGGTGCGTAACAGCCTGCGGTTCGTCTCCTGGAAGGACTACAAAGCCGTCACCCGCGACCTGA
AAGCCATTTATCAGGCCCCCACGGAAGACGCAGGGCAGCATGCGCTGGAAGCGTTCGCCAGCGCATGGGACAACCGCTAC
CCGCAGATAAGCCGTAGCTGGCAGACAAACTGGGCTAACCTGGCGACGTTCTTCGCTTACCCGGCAGACATCCGCAAGGT
GATCTACACAACGAATGCTATCGAGTCGCTGAACAGCGTGATCCGGCATGCCATCAAAAAGCGTAAGGTGTTCCCGAACG
GACGAAGCAGTGAAAAAGGTGGTGTGGTTAGCGATCCAGGCGGCATCACAGAAATGGACCATGCCGCTGAGGGACTGGCG
TATGGCAATGAGCCGCTTTATTATCGAGTTCGGTGA

Upstream 100 bases:

>100_bases
GATGCGGGATCAGACCTGCCCGTCGCGGTGGAAGCTAAGACGCTGTTCAACGTAGGCTTTGACATGGGCCTCCAACGAGC
CTGTACATAAATTTGTGTAA

Downstream 100 bases:

>100_bases
TCGTCTGGACGGTCACTTCTGAGAAAAGGCATTTACACAGAATCGTGTACAGGGTCCCTCCAACCGGTGGATTTTCTCAT
CCACGCGCTGCAGCAGGTAC

Product: transposase, Mutator family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MPDFDMFNPTSKAGYFMNEKQLQALANELAKNLKTPDDLSQFDRLLKKISVEAALNAEMSHHLGYGKNQPKPGANSRNGY
STKTVTTGDGPLELRTPRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGMTTREIAAAFKELYDADVSPALVSKVTDAV
MEQVTEWQNRPLDAVYPIVYLDCIVLKVRQDSRVINKSVFLALGINLEGQKELLGMWLAENEGAKFWLNVLTELKNRGLN
DILIACVDGLKGFPDAINTVYPEARIQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAPTEDAGQHALEAFASAWDNRY
PQISRSWQTNWANLATFFAYPADIRKVIYTTNAIESLNSVIRHAIKKRKVFPNGRSSEKGGVVSDPGGITEMDHAAEGLA
YGNEPLYYRVR

Sequences:

>Translated_411_residues
MPDFDMFNPTSKAGYFMNEKQLQALANELAKNLKTPDDLSQFDRLLKKISVEAALNAEMSHHLGYGKNQPKPGANSRNGY
STKTVTTGDGPLELRTPRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGMTTREIAAAFKELYDADVSPALVSKVTDAV
MEQVTEWQNRPLDAVYPIVYLDCIVLKVRQDSRVINKSVFLALGINLEGQKELLGMWLAENEGAKFWLNVLTELKNRGLN
DILIACVDGLKGFPDAINTVYPEARIQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAPTEDAGQHALEAFASAWDNRY
PQISRSWQTNWANLATFFAYPADIRKVIYTTNAIESLNSVIRHAIKKRKVFPNGRSSEKGGVVSDPGGITEMDHAAEGLA
YGNEPLYYRVR
>Mature_410_residues
PDFDMFNPTSKAGYFMNEKQLQALANELAKNLKTPDDLSQFDRLLKKISVEAALNAEMSHHLGYGKNQPKPGANSRNGYS
TKTVTTGDGPLELRTPRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGMTTREIAAAFKELYDADVSPALVSKVTDAVM
EQVTEWQNRPLDAVYPIVYLDCIVLKVRQDSRVINKSVFLALGINLEGQKELLGMWLAENEGAKFWLNVLTELKNRGLND
ILIACVDGLKGFPDAINTVYPEARIQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAPTEDAGQHALEAFASAWDNRYP
QISRSWQTNWANLATFFAYPADIRKVIYTTNAIESLNSVIRHAIKKRKVFPNGRSSEKGGVVSDPGGITEMDHAAEGLAY
GNEPLYYRVR

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 46132; Mature: 46001

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDFDMFNPTSKAGYFMNEKQLQALANELAKNLKTPDDLSQFDRLLKKISVEAALNAEMS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HHLGYGKNQPKPGANSRNGYSTKTVTTGDGPLELRTPRDRDGSFEPQLVKKNQTRITGMD
HHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCHHHCCCCCEECCCC
NQILSLYAKGMTTREIAAAFKELYDADVSPALVSKVTDAVMEQVTEWQNRPLDAVYPIVY
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LDCIVLKVRQDSRVINKSVFLALGINLEGQKELLGMWLAENEGAKFWLNVLTELKNRGLN
HHHHHHHHCCCHHHHHHHEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHH
DILIACVDGLKGFPDAINTVYPEARIQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAP
HHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
TEDAGQHALEAFASAWDNRYPQISRSWQTNWANLATFFAYPADIRKVIYTTNAIESLNSV
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
IRHAIKKRKVFPNGRSSEKGGVVSDPGGITEMDHAAEGLAYGNEPLYYRVR
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure 
PDFDMFNPTSKAGYFMNEKQLQALANELAKNLKTPDDLSQFDRLLKKISVEAALNAEMS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HHLGYGKNQPKPGANSRNGYSTKTVTTGDGPLELRTPRDRDGSFEPQLVKKNQTRITGMD
HHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCHHHCCCCCEECCCC
NQILSLYAKGMTTREIAAAFKELYDADVSPALVSKVTDAVMEQVTEWQNRPLDAVYPIVY
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LDCIVLKVRQDSRVINKSVFLALGINLEGQKELLGMWLAENEGAKFWLNVLTELKNRGLN
HHHHHHHHCCCHHHHHHHEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHH
DILIACVDGLKGFPDAINTVYPEARIQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAP
HHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
TEDAGQHALEAFASAWDNRYPQISRSWQTNWANLATFFAYPADIRKVIYTTNAIESLNSV
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
IRHAIKKRKVFPNGRSSEKGGVVSDPGGITEMDHAAEGLAYGNEPLYYRVR
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]