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The map label for this gene is yoaF [H]

Identifier: 238919345

GI number: 238919345

Start: 1415753

End: 1415989

Strand: Direct

Name: yoaF [H]

Synonym: NT01EI_1439

Alternate gene names: 238919345

Gene position: 1415753-1415989 (Clockwise)

Preceding gene: 238919344

Following gene: 238919346

Centisome position: 37.14

GC content: 62.45

Gene sequence:

>237_bases
ATGAAGATAATGTTAGTGCTGTTAGGCGTGATGGCGGTGGCGGGGTGTAGCGTCAAAGAGGTCAGGACGCCACCGGTGAT
AGGCATGGCCAACCCCGCAGCGCGTTACTGTGTGGAGCAGGGCGGGATCTTAACGTCGGCGACGGCGGAGCAGGGGCAGT
TTAGCTACTGTACGTTGCCGGGCGGCGAGCGCATCGGGACCTGGGCGCTGTATCGCCGCAGCCATCCTCAGGCATGA

Upstream 100 bases:

>100_bases
GCAGGTGAACGCCGCTGGCACTTTAAACATTATCCTATGTGCAACATGCCACGGTACGCGGGATCATGGCTATCCAGATT
AGCGATATAGAGAGTGCATC

Downstream 100 bases:

>100_bases
CGCGATGTGAGTGATAGAAGAAAGACGGACCGCATTCGCGGCCCGGCGATAGCGTATTCCTGCGGCGATGCGGGATCAGA
CCTGCCCGTCGCGGTGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MKIMLVLLGVMAVAGCSVKEVRTPPVIGMANPAARYCVEQGGILTSATAEQGQFSYCTLPGGERIGTWALYRRSHPQA

Sequences:

>Translated_78_residues
MKIMLVLLGVMAVAGCSVKEVRTPPVIGMANPAARYCVEQGGILTSATAEQGQFSYCTLPGGERIGTWALYRRSHPQA
>Mature_78_residues
MKIMLVLLGVMAVAGCSVKEVRTPPVIGMANPAARYCVEQGGILTSATAEQGQFSYCTLPGGERIGTWALYRRSHPQA

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788094, Length=80, Percent_Identity=50, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005590 [H]

Pfam domain/function: PF03891 DUF333 [H]

EC number: NA

Molecular weight: Translated: 8311; Mature: 8311

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMLVLLGVMAVAGCSVKEVRTPPVIGMANPAARYCVEQGGILTSATAEQGQFSYCTLP
CHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHCCCEEEECCCCCCCEEEEECC
GGERIGTWALYRRSHPQA
CCCCCCHHEEEECCCCCC
>Mature Secondary Structure
MKIMLVLLGVMAVAGCSVKEVRTPPVIGMANPAARYCVEQGGILTSATAEQGQFSYCTLP
CHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHCCCEEEECCCCCCCEEEEECC
GGERIGTWALYRRSHPQA
CCCCCCHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]