| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919344
Identifier: 238919344
GI number: 238919344
Start: 1414719
End: 1415651
Strand: Direct
Name: 238919344
Synonym: NT01EI_1438
Alternate gene names: NA
Gene position: 1414719-1415651 (Clockwise)
Preceding gene: 238919343
Following gene: 238919345
Centisome position: 37.11
GC content: 59.49
Gene sequence:
>933_bases ATGTCTTATCCTGAGTGGCTGGATCTATTGGCCTGGGGCTGGTTAATCAGTGCGCTGATTTGTGCCTTAATTATCGCCTG GGATATTGGCCGTGGGCATCCACAGCCGATGGCGATAATGACGGTTGCCTGGCCGATTAATGCGCTTTACTTTGGCGTAT TGGGGCTGGGGGCCTATTTCTGGTTTGGCCGTGGCCATCCCGGCGATCGCTGCGGCATGATGGCGATGGATATGCCAATG GCGGGCCACGGGGAGAAGCCGATGGTGATGGATATGCCGATGGCGGGCCACGGGGAGAAGCCGATGGCGATGGATATGCC GATGGCGGGCCACGGGGAGAAGCCGATGGCGATGGATATGCCGATGGCGGGCCACGGGGAGAAGCCGATGGCGGGCCACG GGGAGAAGCCGATGGCGATGGGTATGCCGATGGCGGGCCACGGGGAGAAGCCGATGGCGATGGATATGCCGATGGCGATG AAGCGGGGTCCGGCAGGGTGGAAGAGTATCTTTAAGACCAGTACCCACTGCGGCACGGGGTGTACCCTGGCCGATATCCT GGGCGAGGGGATCGCTCTGGTGGTGCCGGTGACGCTGTTAGGCAGCCCGCTGCTGGGATCGTGGACGCTGGATTTTGTGC TGGCGCTGTGCCTGGGGATCTTCTTTCAGTATTGGCCTGCGCGTCAGATGGGACAGGCGCGCTGGGCCGCACTGAAGAGC GCAGTTAAAGCGGATGTGCTCTCACTGATCTGTTGGCAGCTGGGAATGTATGTCTGGATGACGATTGCGCTGTTTCTCCT GTTTACGCCGGAGATGCCGCGCGCCAGCGCGCTGTATTGGTTTATGATGCAGATTGCCATGATAGTGGGCTTCTGTAGTG CGTATCCGATGAATAAGTGGTTGGTCAGCAAAGGGATTAAGCACGCGATGTAG
Upstream 100 bases:
>100_bases CTGGCGGTAACGCAGCGGCGATAGGCCGTCTATTTTCTGTCGTGGTTTTGGCAGTGAGGCAGGATGACGGATGAATACGC TGTATATTGAGGAGTAAATA
Downstream 100 bases:
>100_bases CGCAGGTGAACGCCGCTGGCACTTTAAACATTATCCTATGTGCAACATGCCACGGTACGCGGGATCATGGCTATCCAGAT TAGCGATATAGAGAGTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Protein
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSYPEWLDLLAWGWLISALICALIIAWDIGRGHPQPMAIMTVAWPINALYFGVLGLGAYFWFGRGHPGDRCGMMAMDMPM AGHGEKPMVMDMPMAGHGEKPMAMDMPMAGHGEKPMAMDMPMAGHGEKPMAGHGEKPMAMGMPMAGHGEKPMAMDMPMAM KRGPAGWKSIFKTSTHCGTGCTLADILGEGIALVVPVTLLGSPLLGSWTLDFVLALCLGIFFQYWPARQMGQARWAALKS AVKADVLSLICWQLGMYVWMTIALFLLFTPEMPRASALYWFMMQIAMIVGFCSAYPMNKWLVSKGIKHAM
Sequences:
>Translated_310_residues MSYPEWLDLLAWGWLISALICALIIAWDIGRGHPQPMAIMTVAWPINALYFGVLGLGAYFWFGRGHPGDRCGMMAMDMPM AGHGEKPMVMDMPMAGHGEKPMAMDMPMAGHGEKPMAMDMPMAGHGEKPMAGHGEKPMAMGMPMAGHGEKPMAMDMPMAM KRGPAGWKSIFKTSTHCGTGCTLADILGEGIALVVPVTLLGSPLLGSWTLDFVLALCLGIFFQYWPARQMGQARWAALKS AVKADVLSLICWQLGMYVWMTIALFLLFTPEMPRASALYWFMMQIAMIVGFCSAYPMNKWLVSKGIKHAM >Mature_309_residues SYPEWLDLLAWGWLISALICALIIAWDIGRGHPQPMAIMTVAWPINALYFGVLGLGAYFWFGRGHPGDRCGMMAMDMPMA GHGEKPMVMDMPMAGHGEKPMAMDMPMAGHGEKPMAMDMPMAGHGEKPMAGHGEKPMAMGMPMAGHGEKPMAMDMPMAMK RGPAGWKSIFKTSTHCGTGCTLADILGEGIALVVPVTLLGSPLLGSWTLDFVLALCLGIFFQYWPARQMGQARWAALKSA VKADVLSLICWQLGMYVWMTIALFLLFTPEMPRASALYWFMMQIAMIVGFCSAYPMNKWLVSKGIKHAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34002; Mature: 33871
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 12.6 %Met (Translated Protein) 14.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 12.3 %Met (Mature Protein) 14.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYPEWLDLLAWGWLISALICALIIAWDIGRGHPQPMAIMTVAWPINALYFGVLGLGAYF CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH WFGRGHPGDRCGMMAMDMPMAGHGEKPMVMDMPMAGHGEKPMAMDMPMAGHGEKPMAMDM HCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCEECC PMAGHGEKPMAGHGEKPMAMGMPMAGHGEKPMAMDMPMAMKRGPAGWKSIFKTSTHCGTG CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEECCCHHHHCCCHHHHHHHHCCCCCCCC CTLADILGEGIALVVPVTLLGSPLLGSWTLDFVLALCLGIFFQYWPARQMGQARWAALKS CHHHHHHCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AVKADVLSLICWQLGMYVWMTIALFLLFTPEMPRASALYWFMMQIAMIVGFCSAYPMNKW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH LVSKGIKHAM HHHHHHHHCC >Mature Secondary Structure SYPEWLDLLAWGWLISALICALIIAWDIGRGHPQPMAIMTVAWPINALYFGVLGLGAYF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH WFGRGHPGDRCGMMAMDMPMAGHGEKPMVMDMPMAGHGEKPMAMDMPMAGHGEKPMAMDM HCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCEECC PMAGHGEKPMAGHGEKPMAMGMPMAGHGEKPMAMDMPMAMKRGPAGWKSIFKTSTHCGTG CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEECCCHHHHCCCHHHHHHHHCCCCCCCC CTLADILGEGIALVVPVTLLGSPLLGSWTLDFVLALCLGIFFQYWPARQMGQARWAALKS CHHHHHHCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AVKADVLSLICWQLGMYVWMTIALFLLFTPEMPRASALYWFMMQIAMIVGFCSAYPMNKW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH LVSKGIKHAM HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA