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The map label for this gene is arnC

Identifier: 238919323

GI number: 238919323

Start: 1401228

End: 1402205

Strand: Direct

Name: arnC

Synonym: NT01EI_1414

Alternate gene names: 238919323

Gene position: 1401228-1402205 (Clockwise)

Preceding gene: 238919322

Following gene: 238919324

Centisome position: 36.76

GC content: 57.06

Gene sequence:

>978_bases
ATGAGTGATTTTAAAACCATCCAGTTTGTATCGGTGGTAATACCGGTTTACAACGAGCAGGACAGCCTGTCGGAGCTGCT
GAAAAGAACTATTGCCGCCTGTGACTCCATGGGAAAACAGTATGAGATAGTGCTGGTTGACGACGGCAGCAGCGATAGAT
CGGCGGAGATCCTCCGCGAGGCGGCGCAGCGCCCGGGAAGCCGGGTCGTCGCGGTTTTACTGAACCGTAACTATGGCCAG
CATTCGGCGATTATGGCTGGATTTAACCACATTAAAGGCGATCTGGTGATCACCCTGGATGCCGACCTGCAGAATCCGCC
GGAGGAGATCCCACGTCTGGTGGAGGCTGCCGATCAGGGTTATGACGTGGTGGGTACCATCCGGCAGGACCGTCAGGATA
GCTGGTTCCGTAGGCGCGCCTCGCGCCTGATCAATGGCCTGATTCAGCGCACCACCGGCAAGAGCATGAGCGATTATGGC
TGCATGCTGCGCGCCTACCGCAGCAGCGTTATCAAAGCCATGTTGCACTGCCATGAGCGCAGTACCTTCATCCCCATTCT
GGCCAACAGTTTTGCCCGCCGCACCATCGAGATCCCGGTGAAACATGCCGAGCGCGAGCACGGCGAGTCCAAGTATGGGC
TGATGAAGCTGATCAATCTGATGTACGACCTGGTGACCTGTCTGACCACAACCCCCCTGAGGGCGTTGAGTATTTTTGGC
AGCGTCGTTGCGCTGCTGGGCTTCGCCTTTGCCGTGCTGCTGATCCTGATGCGTTTAACCCTCGGGCCTCAGTGGGCTGC
GGAAGGGGTGTTTACCCTGTTTGCCGTGCTTTTTATCTTCATCGGCGCGCAGTTTGTCGGGATGGGCCTGCTGGGTGAGT
ATATCGGCCGCATCTATAACGACGTGCGCGCCCGCCCCCGCTATTTTATTCAGAATGTCGTCCGCGCTAACCAGCCGGAC
GAAGAACAGGAAAAATGA

Upstream 100 bases:

>100_bases
CTGCTCTCTGCCGCTGTTTCCGGATATGACCGAGGCAGACGTCGATCGGGTGATCGCCGCGTTGAAAGAGATTATTGAGC
AGTAACGGTTGGATATGACA

Downstream 100 bases:

>100_bases
TCATGAAAGCTGTTGTCTTTGCCTATCACGATATGGGCTGTGCCGGTGTGCAGTCATTGATTGATGCCGGTTACGAAATC
GCTGCCATCGTTACCCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSDFKTIQFVSVVIPVYNEQDSLSELLKRTIAACDSMGKQYEIVLVDDGSSDRSAEILREAAQRPGSRVVAVLLNRNYGQ
HSAIMAGFNHIKGDLVITLDADLQNPPEEIPRLVEAADQGYDVVGTIRQDRQDSWFRRRASRLINGLIQRTTGKSMSDYG
CMLRAYRSSVIKAMLHCHERSTFIPILANSFARRTIEIPVKHAEREHGESKYGLMKLINLMYDLVTCLTTTPLRALSIFG
SVVALLGFAFAVLLILMRLTLGPQWAAEGVFTLFAVLFIFIGAQFVGMGLLGEYIGRIYNDVRARPRYFIQNVVRANQPD
EEQEK

Sequences:

>Translated_325_residues
MSDFKTIQFVSVVIPVYNEQDSLSELLKRTIAACDSMGKQYEIVLVDDGSSDRSAEILREAAQRPGSRVVAVLLNRNYGQ
HSAIMAGFNHIKGDLVITLDADLQNPPEEIPRLVEAADQGYDVVGTIRQDRQDSWFRRRASRLINGLIQRTTGKSMSDYG
CMLRAYRSSVIKAMLHCHERSTFIPILANSFARRTIEIPVKHAEREHGESKYGLMKLINLMYDLVTCLTTTPLRALSIFG
SVVALLGFAFAVLLILMRLTLGPQWAAEGVFTLFAVLFIFIGAQFVGMGLLGEYIGRIYNDVRARPRYFIQNVVRANQPD
EEQEK
>Mature_324_residues
SDFKTIQFVSVVIPVYNEQDSLSELLKRTIAACDSMGKQYEIVLVDDGSSDRSAEILREAAQRPGSRVVAVLLNRNYGQH
SAIMAGFNHIKGDLVITLDADLQNPPEEIPRLVEAADQGYDVVGTIRQDRQDSWFRRRASRLINGLIQRTTGKSMSDYGC
MLRAYRSSVIKAMLHCHERSTFIPILANSFARRTIEIPVKHAEREHGESKYGLMKLINLMYDLVTCLTTTPLRALSIFGS
VVALLGFAFAVLLILMRLTLGPQWAAEGVFTLFAVLFIFIGAQFVGMGLLGEYIGRIYNDVRARPRYFIQNVVRANQPDE
EQEK

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family

Homologues:

Organism=Homo sapiens, GI4503363, Length=233, Percent_Identity=27.8969957081545, Blast_Score=92, Evalue=6e-19,
Organism=Escherichia coli, GI1788588, Length=322, Percent_Identity=73.6024844720497, Blast_Score=519, Evalue=1e-148,
Organism=Escherichia coli, GI1788692, Length=313, Percent_Identity=31.629392971246, Blast_Score=159, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6325441, Length=214, Percent_Identity=28.0373831775701, Blast_Score=76, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24585265, Length=233, Percent_Identity=26.1802575107296, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARNC_EDWI9 (C5BDQ5)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002932838.1
- GeneID:   7962230
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_1414
- OMA:   ITRITMT
- ProtClustDB:   CLSK2813055
- HAMAP:   MF_01164
- InterPro:   IPR022857
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: =2.7.8.30

Molecular weight: Translated: 36539; Mature: 36408

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1a51bb48)-; HASH(0x1c5c2f38)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFKTIQFVSVVIPVYNEQDSLSELLKRTIAACDSMGKQYEIVLVDDGSSDRSAEILRE
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHH
AAQRPGSRVVAVLLNRNYGQHSAIMAGFNHIKGDLVITLDADLQNPPEEIPRLVEAADQG
HHHCCCHHEEHHEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
YDVVGTIRQDRQDSWFRRRASRLINGLIQRTTGKSMSDYGCMLRAYRSSVIKAMLHCHER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
STFIPILANSFARRTIEIPVKHAEREHGESKYGLMKLINLMYDLVTCLTTTPLRALSIFG
CCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SVVALLGFAFAVLLILMRLTLGPQWAAEGVFTLFAVLFIFIGAQFVGMGLLGEYIGRIYN
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVRARPRYFIQNVVRANQPDEEQEK
HHHCCHHHHHHHHHHCCCCCHHCCH
>Mature Secondary Structure 
SDFKTIQFVSVVIPVYNEQDSLSELLKRTIAACDSMGKQYEIVLVDDGSSDRSAEILRE
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHH
AAQRPGSRVVAVLLNRNYGQHSAIMAGFNHIKGDLVITLDADLQNPPEEIPRLVEAADQG
HHHCCCHHEEHHEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
YDVVGTIRQDRQDSWFRRRASRLINGLIQRTTGKSMSDYGCMLRAYRSSVIKAMLHCHER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
STFIPILANSFARRTIEIPVKHAEREHGESKYGLMKLINLMYDLVTCLTTTPLRALSIFG
CCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SVVALLGFAFAVLLILMRLTLGPQWAAEGVFTLFAVLFIFIGAQFVGMGLLGEYIGRIYN
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVRARPRYFIQNVVRANQPDEEQEK
HHHCCHHHHHHHHHHCCCCCHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA