| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is flgI [H]
Identifier: 238919263
GI number: 238919263
Start: 1338562
End: 1339701
Strand: Direct
Name: flgI [H]
Synonym: NT01EI_1353
Alternate gene names: 238919263
Gene position: 1338562-1339701 (Clockwise)
Preceding gene: 238919262
Following gene: 238919264
Centisome position: 35.11
GC content: 60.53
Gene sequence:
>1140_bases ATGGGTAATTGTGGACTATACACCCGCTGGCGACATGCCGGTTTCTGGCTGACCGGCGTACTGCTGGCGCTGGGGCTACT GAGTCAGGGGGCACAGGCCGAGCGTATCCGCGACCTCACCACCATTCAGGGCGTGCGCAGCAACGCCCTGATTGGCTATG GTCTGGTGGTGGGGCTGGATGGTACCGGCGATCAGACCATGCAGACACCGTTCACCACGCAGAGTCTGACCAACATGCTG TCCCAGCTGGGGATCACCGTACCGGCCGGTACCAACATGCAGCTGAAAAACGTGGCTGCGGTCATGGTAACGGCAAACCT GCCGCCGTTTGCCCGCCCGGGACAGACCATCGATGTGGTGGTGTCCTCCATGGGTAACGCCAAGAGCCTGCGCGGCGGCA CATTGCTGATGACCCCACTGAAAGGTGTGGACAATCAGGTCTATGCCCTGGCACAGGGGAATATTCTGGTCGGCGGGGCC GGTGCCTCGGCCGGCGGCAGCAGTGTTCAGGTCAATCAGCTTGCCGGTGGCCGTATCAGCGGTGGTGCCACCATCGAACG CTCCGTACCGACCACCTTCGGTCACGGTAACGTGATTAATCTGGAGCTGAACAACGAAAACTTCACCCTGGCTGAGCGCA TCAGTGATGCGATTAACCGTGCCAACGGACTGGGTTCCGCGACGCCACTGGACGCCCGTACCGTGCAGGTACTGGTACCT CAGGGTGGCAGCAATCAGGTACGTGTCCTGGCCAATATTCAGAATATTGAGGTGAATGCCGGAACGTTCGATGCAAAGGT CATCATCAACTCCCGCACCGGATCGGTGGTGATGAACCGGAATGTTGAGCTGGATTCGTGTGCGGTGGCTCAGGGGAACC TGTCGGTGGTGGTGGATCGCCAGCTGAACGTCAGCCAGCCGAATACGCCGTTGGGCGGTGGGCAGACGGTGGTGACGCCA AATACCCAGATTTCGGTCAATCAGAGCGGTGGTGCCCTGCATCAGGTCCGGGCCGGCGCCAATCTGAACAGCGTGGTGCG CGCGCTGAACGCGCTGGGGGCAACGCCGAACGATCTGATGTCAATCCTGCAGGCAATGAAGAGTGCCGGTTGCCTGCGGG CCAAGCTGGAGATTATCTGA
Upstream 100 bases:
>100_bases ATTGAATATGTGGGCAGCGGCTATATCAATGAAGCGCAGAATATGGGCTGGCTGCAGCGCTTCTTCCTTAATCTCTCCCC TTATTGATAGGTATTTGGTT
Downstream 100 bases:
>100_bases TGGCTGACGATAGTCTGGCGTTTTCCGGCGCCGCGTATGATGCGCGGTCGCTGAATACGCTGAAATACAGCGCTGCCGGA GGGTCCGATAAGGCGCTGCG
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein 1 [H]
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MGNCGLYTRWRHAGFWLTGVLLALGLLSQGAQAERIRDLTTIQGVRSNALIGYGLVVGLDGTGDQTMQTPFTTQSLTNML SQLGITVPAGTNMQLKNVAAVMVTANLPPFARPGQTIDVVVSSMGNAKSLRGGTLLMTPLKGVDNQVYALAQGNILVGGA GASAGGSSVQVNQLAGGRISGGATIERSVPTTFGHGNVINLELNNENFTLAERISDAINRANGLGSATPLDARTVQVLVP QGGSNQVRVLANIQNIEVNAGTFDAKVIINSRTGSVVMNRNVELDSCAVAQGNLSVVVDRQLNVSQPNTPLGGGQTVVTP NTQISVNQSGGALHQVRAGANLNSVVRALNALGATPNDLMSILQAMKSAGCLRAKLEII
Sequences:
>Translated_379_residues MGNCGLYTRWRHAGFWLTGVLLALGLLSQGAQAERIRDLTTIQGVRSNALIGYGLVVGLDGTGDQTMQTPFTTQSLTNML SQLGITVPAGTNMQLKNVAAVMVTANLPPFARPGQTIDVVVSSMGNAKSLRGGTLLMTPLKGVDNQVYALAQGNILVGGA GASAGGSSVQVNQLAGGRISGGATIERSVPTTFGHGNVINLELNNENFTLAERISDAINRANGLGSATPLDARTVQVLVP QGGSNQVRVLANIQNIEVNAGTFDAKVIINSRTGSVVMNRNVELDSCAVAQGNLSVVVDRQLNVSQPNTPLGGGQTVVTP NTQISVNQSGGALHQVRAGANLNSVVRALNALGATPNDLMSILQAMKSAGCLRAKLEII >Mature_378_residues GNCGLYTRWRHAGFWLTGVLLALGLLSQGAQAERIRDLTTIQGVRSNALIGYGLVVGLDGTGDQTMQTPFTTQSLTNMLS QLGITVPAGTNMQLKNVAAVMVTANLPPFARPGQTIDVVVSSMGNAKSLRGGTLLMTPLKGVDNQVYALAQGNILVGGAG ASAGGSSVQVNQLAGGRISGGATIERSVPTTFGHGNVINLELNNENFTLAERISDAINRANGLGSATPLDARTVQVLVPQ GGSNQVRVLANIQNIEVNAGTFDAKVIINSRTGSVVMNRNVELDSCAVAQGNLSVVVDRQLNVSQPNTPLGGGQTVVTPN TQISVNQSGGALHQVRAGANLNSVVRALNALGATPNDLMSILQAMKSAGCLRAKLEII
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family [H]
Homologues:
Organism=Escherichia coli, GI1787320, Length=358, Percent_Identity=78.4916201117318, Blast_Score=508, Evalue=1e-145,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001782 [H]
Pfam domain/function: PF02119 FlgI [H]
EC number: NA
Molecular weight: Translated: 39195; Mature: 39064
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNCGLYTRWRHAGFWLTGVLLALGLLSQGAQAERIRDLTTIQGVRSNALIGYGLVVGLD CCCCCCEEEHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEC GTGDQTMQTPFTTQSLTNMLSQLGITVPAGTNMQLKNVAAVMVTANLPPFARPGQTIDVV CCCCCCEECCCCHHHHHHHHHHCCEECCCCCCEEECCEEEEEEEECCCCCCCCCCCHHHH VSSMGNAKSLRGGTLLMTPLKGVDNQVYALAQGNILVGGAGASAGGSSVQVNQLAGGRIS HHCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCEEEEECCCCCCCCEEEEEECCCCEEC GGATIERSVPTTFGHGNVINLELNNENFTLAERISDAINRANGLGSATPLDARTVQVLVP CCCEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEE QGGSNQVRVLANIQNIEVNAGTFDAKVIINSRTGSVVMNRNVELDSCAVAQGNLSVVVDR CCCCCCEEEEEEEEEEEEECCCEEEEEEEECCCCCEEEECCCCCCCEEEECCCEEEEEEC QLNVSQPNTPLGGGQTVVTPNTQISVNQSGGALHQVRAGANLNSVVRALNALGATPNDLM CCCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHH SILQAMKSAGCLRAKLEII HHHHHHHHCCCEEEEEEEC >Mature Secondary Structure GNCGLYTRWRHAGFWLTGVLLALGLLSQGAQAERIRDLTTIQGVRSNALIGYGLVVGLD CCCCCEEEHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEC GTGDQTMQTPFTTQSLTNMLSQLGITVPAGTNMQLKNVAAVMVTANLPPFARPGQTIDVV CCCCCCEECCCCHHHHHHHHHHCCEECCCCCCEEECCEEEEEEEECCCCCCCCCCCHHHH VSSMGNAKSLRGGTLLMTPLKGVDNQVYALAQGNILVGGAGASAGGSSVQVNQLAGGRIS HHCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCEEEEECCCCCCCCEEEEEECCCCEEC GGATIERSVPTTFGHGNVINLELNNENFTLAERISDAINRANGLGSATPLDARTVQVLVP CCCEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEE QGGSNQVRVLANIQNIEVNAGTFDAKVIINSRTGSVVMNRNVELDSCAVAQGNLSVVVDR CCCCCCEEEEEEEEEEEEECCCEEEEEEEECCCCCEEEECCCCCCCEEEECCCEEEEEEC QLNVSQPNTPLGGGQTVVTPNTQISVNQSGGALHQVRAGANLNSVVRALNALGATPNDLM CCCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHH SILQAMKSAGCLRAKLEII HHHHHHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA