Click here to switch to the map view.

The map label for this gene is flgH [H]

Identifier: 238919262

GI number: 238919262

Start: 1337862

End: 1338548

Strand: Direct

Name: flgH [H]

Synonym: NT01EI_1352

Alternate gene names: 238919262

Gene position: 1337862-1338548 (Clockwise)

Preceding gene: 238919261

Following gene: 238919263

Centisome position: 35.09

GC content: 56.91

Gene sequence:

>687_bases
ATGCAAAAACATTCGGGAATCGCACTGTTGTGTACGCTGGCGCTGTCGGGCTGCGCCTATATTCCCCATGATCAGGTGGT
AACCGGGCCGACGACTGCCACGCCGGCCCCGGCCGTTCCCCCGCGTCCCAATGGCTCCATTTTTCAGACGGTTCAGCCGA
TAAACTACGGCTATCAGCCTTTGTTTGAGGATCGCCGCCCGCGCAATGTCGGCGATATCCTGACCATTGTCCTGCAGGAA
AACGTCAGCGCCAGTAAGAACTCGTCGGCCAACGCCAGCCGCGACGGGAGCTCCAAGTTCGATTTCTCAACCGTTCCCCG
CTATCTGGAAGGGCTGTTCGGTAACGCGCGCGCCAATATGGAAGTGGATGGTGATAACAAGTTCAGCGGTAAGGGGGGCG
CCAAGGCCAACAACACCTTTACCGGGACCATTACGGTCACCGTGGATCAGGTGCAGGCCAACGGTAACCTGAAGGTGGTC
GGGGAGAAACAGATCGCCATCAATCAGGGGACCGAATACATTCGTTTCTCCGGCGTCGTCAACCCACGCACCATCAGCGG
TAATAACTCCGTATCCTCCACCCAGGTGGCGGATGCACGCATTGAATATGTGGGCAGCGGCTATATCAATGAAGCGCAGA
ATATGGGCTGGCTGCAGCGCTTCTTCCTTAATCTCTCCCCTTATTGA

Upstream 100 bases:

>100_bases
GGTGACAGACCCGCTGCAGGCATGCACCGGGTCTGTTGCAGGTGTACCTTCGGGTACCGTGACGTGAATTGACGGTAATG
GCAGAAAAGGCAGAATAACG

Downstream 100 bases:

>100_bases
TAGGTATTTGGTTATGGGTAATTGTGGACTATACACCCGCTGGCGACATGCCGGTTTCTGGCTGACCGGCGTACTGCTGG
CGCTGGGGCTACTGAGTCAG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein 1 [H]

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MQKHSGIALLCTLALSGCAYIPHDQVVTGPTTATPAPAVPPRPNGSIFQTVQPINYGYQPLFEDRRPRNVGDILTIVLQE
NVSASKNSSANASRDGSSKFDFSTVPRYLEGLFGNARANMEVDGDNKFSGKGGAKANNTFTGTITVTVDQVQANGNLKVV
GEKQIAINQGTEYIRFSGVVNPRTISGNNSVSSTQVADARIEYVGSGYINEAQNMGWLQRFFLNLSPY

Sequences:

>Translated_228_residues
MQKHSGIALLCTLALSGCAYIPHDQVVTGPTTATPAPAVPPRPNGSIFQTVQPINYGYQPLFEDRRPRNVGDILTIVLQE
NVSASKNSSANASRDGSSKFDFSTVPRYLEGLFGNARANMEVDGDNKFSGKGGAKANNTFTGTITVTVDQVQANGNLKVV
GEKQIAINQGTEYIRFSGVVNPRTISGNNSVSSTQVADARIEYVGSGYINEAQNMGWLQRFFLNLSPY
>Mature_228_residues
MQKHSGIALLCTLALSGCAYIPHDQVVTGPTTATPAPAVPPRPNGSIFQTVQPINYGYQPLFEDRRPRNVGDILTIVLQE
NVSASKNSSANASRDGSSKFDFSTVPRYLEGLFGNARANMEVDGDNKFSGKGGAKANNTFTGTITVTVDQVQANGNLKVV
GEKQIAINQGTEYIRFSGVVNPRTISGNNSVSSTQVADARIEYVGSGYINEAQNMGWLQRFFLNLSPY

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=231, Percent_Identity=74.8917748917749, Blast_Score=332, Evalue=1e-92,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24511; Mature: 24511

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKHSGIALLCTLALSGCAYIPHDQVVTGPTTATPAPAVPPRPNGSIFQTVQPINYGYQP
CCCCCCHHHEEEHHHHCCEECCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
LFEDRRPRNVGDILTIVLQENVSASKNSSANASRDGSSKFDFSTVPRYLEGLFGNARANM
CCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCE
EVDGDNKFSGKGGAKANNTFTGTITVTVDQVQANGNLKVVGEKQIAINQGTEYIRFSGVV
EECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEEEECCEEEECCCCCEEEEECCC
NPRTISGNNSVSSTQVADARIEYVGSGYINEAQNMGWLQRFFLNLSPY
CCEEECCCCCCCCCCHHHEEEEEECCCCHHHHHCHHHHHHHHHCCCCC
>Mature Secondary Structure
MQKHSGIALLCTLALSGCAYIPHDQVVTGPTTATPAPAVPPRPNGSIFQTVQPINYGYQP
CCCCCCHHHEEEHHHHCCEECCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
LFEDRRPRNVGDILTIVLQENVSASKNSSANASRDGSSKFDFSTVPRYLEGLFGNARANM
CCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCE
EVDGDNKFSGKGGAKANNTFTGTITVTVDQVQANGNLKVVGEKQIAINQGTEYIRFSGVV
EECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEEEECCEEEECCCCCEEEEECCC
NPRTISGNNSVSSTQVADARIEYVGSGYINEAQNMGWLQRFFLNLSPY
CCEEECCCCCCCCCCHHHEEEEEECCCCHHHHHCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA