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The map label for this gene is flgC [H]

Identifier: 238919257

GI number: 238919257

Start: 1333710

End: 1334114

Strand: Direct

Name: flgC [H]

Synonym: NT01EI_1347

Alternate gene names: 238919257

Gene position: 1333710-1334114 (Clockwise)

Preceding gene: 238919256

Following gene: 238919258

Centisome position: 34.98

GC content: 54.81

Gene sequence:

>405_bases
ATGGCGCTTCTTTCTATTTTTGATATTTCCGGTTCTGCGCTGACGGCACAGTCCGAGCGGATGAACGTTGCGGCCAGTAA
CATGGCCAACGCCGACAGTGTGACCGGACCGGATGGCCAGCCCTACCATGCCAAGCAGGTTGTGTTTCAGGTCAACCCGG
CGGCAGGGGAAGAGATTGGCGGAGTCCGGGTCTCCCAGATAGTGGAGGATCCGGCCCCGGAGCGTCTGGTATACCAGCCG
GGTAATCCATTGGCCGATGCCAAAGGGTATGTCCGGATGCCCAATGTCGACGTGGTCAGTGAAATGGTGAACTCCATTGC
CGCCTCCCGGAGCTATCAGGCTAACGTTGAGGTATTAAATACTACCAAGTCATTGATGATGAAGACATTAACCCTTGGAC
AATAA

Upstream 100 bases:

>100_bases
TACGCAGTTTGCCGATAACAGCCTGCGCTACCAGACCGATCTGACCGTACTGAGCGGCCAGATTAAAAACATGATGGCTG
TGCTGCAACAGGGGTAATTC

Downstream 100 bases:

>100_bases
TTACGGGAGGCATGATGGCCATTTCGGTATCGCTTAATGATCCGGTAGATACCAGCTCGCCGGTCAATGCCAACAGTAAG
ACCGGGCTGGTTGCGGATAA

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MALLSIFDISGSALTAQSERMNVAASNMANADSVTGPDGQPYHAKQVVFQVNPAAGEEIGGVRVSQIVEDPAPERLVYQP
GNPLADAKGYVRMPNVDVVSEMVNSIAASRSYQANVEVLNTTKSLMMKTLTLGQ

Sequences:

>Translated_134_residues
MALLSIFDISGSALTAQSERMNVAASNMANADSVTGPDGQPYHAKQVVFQVNPAAGEEIGGVRVSQIVEDPAPERLVYQP
GNPLADAKGYVRMPNVDVVSEMVNSIAASRSYQANVEVLNTTKSLMMKTLTLGQ
>Mature_133_residues
ALLSIFDISGSALTAQSERMNVAASNMANADSVTGPDGQPYHAKQVVFQVNPAAGEEIGGVRVSQIVEDPAPERLVYQPG
NPLADAKGYVRMPNVDVVSEMVNSIAASRSYQANVEVLNTTKSLMMKTLTLGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=134, Percent_Identity=78.3582089552239, Blast_Score=223, Evalue=4e-60,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14210; Mature: 14079

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLSIFDISGSALTAQSERMNVAASNMANADSVTGPDGQPYHAKQVVFQVNPAAGEEIG
CCEEEEEECCCCEEECCCHHCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
GVRVSQIVEDPAPERLVYQPGNPLADAKGYVRMPNVDVVSEMVNSIAASRSYQANVEVLN
CEEHHHHHCCCCCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEEEH
TTKSLMMKTLTLGQ
HHHHHHHHHHHCCC
>Mature Secondary Structure 
ALLSIFDISGSALTAQSERMNVAASNMANADSVTGPDGQPYHAKQVVFQVNPAAGEEIG
CEEEEEECCCCEEECCCHHCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
GVRVSQIVEDPAPERLVYQPGNPLADAKGYVRMPNVDVVSEMVNSIAASRSYQANVEVLN
CEEHHHHHCCCCCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEEEH
TTKSLMMKTLTLGQ
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA