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The map label for this gene is flgB [H]

Identifier: 238919256

GI number: 238919256

Start: 1333293

End: 1333706

Strand: Direct

Name: flgB [H]

Synonym: NT01EI_1346

Alternate gene names: 238919256

Gene position: 1333293-1333706 (Clockwise)

Preceding gene: 238919252

Following gene: 238919257

Centisome position: 34.97

GC content: 57.49

Gene sequence:

>414_bases
ATGCTCGATAAACTGGATGCCGCGTTTCGTTTCCAACAGGATGCCCTGAACCTGCGTGCGCAGCGTCAGGAAATTCTGGC
GGCGAACATCGCCAACGCGGATACCCCCGGCTACCAGGCCCGGGACATTGACTTTGCCTCACAGCTGTCGAGGGTCCTTG
AAAATGGGCGTCCTGACGGCAGCGGCATCGCTCTTACACTCACCTCAGCACGCCATATTCCGGCTCAGAATGTGCAGCCA
CCGTCACTGGATTTGTTGTTCCGGGTGCCGGACCAGCCGTCGCTGGATGGCAACACTGTCAATATGAACCGCGAGCGTAC
GCAGTTTGCCGATAACAGCCTGCGCTACCAGACCGATCTGACCGTACTGAGCGGCCAGATTAAAAACATGATGGCTGTGC
TGCAACAGGGGTAA

Upstream 100 bases:

>100_bases
GCTTTACCGTACCGGTCCTATCCTATGCACTCCAAATTGTCATTGACACAGGGTGGGGGGAGCTTTTCCGCCATCCCAGC
TAACCGATAGCGGAGACGGT

Downstream 100 bases:

>100_bases
TTCATGGCGCTTCTTTCTATTTTTGATATTTCCGGTTCTGCGCTGACGGCACAGTCCGAGCGGATGAACGTTGCGGCCAG
TAACATGGCCAACGCCGACA

Product: flagellar basal body rod protein FlgB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLDKLDAAFRFQQDALNLRAQRQEILAANIANADTPGYQARDIDFASQLSRVLENGRPDGSGIALTLTSARHIPAQNVQP
PSLDLLFRVPDQPSLDGNTVNMNRERTQFADNSLRYQTDLTVLSGQIKNMMAVLQQG

Sequences:

>Translated_137_residues
MLDKLDAAFRFQQDALNLRAQRQEILAANIANADTPGYQARDIDFASQLSRVLENGRPDGSGIALTLTSARHIPAQNVQP
PSLDLLFRVPDQPSLDGNTVNMNRERTQFADNSLRYQTDLTVLSGQIKNMMAVLQQG
>Mature_137_residues
MLDKLDAAFRFQQDALNLRAQRQEILAANIANADTPGYQARDIDFASQLSRVLENGRPDGSGIALTLTSARHIPAQNVQP
PSLDLLFRVPDQPSLDGNTVNMNRERTQFADNSLRYQTDLTVLSGQIKNMMAVLQQG

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787313, Length=137, Percent_Identity=73.7226277372263, Blast_Score=211, Evalue=1e-56,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006300 [H]

Pfam domain/function: PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15167; Mature: 15167

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKLDAAFRFQQDALNLRAQRQEILAANIANADTPGYQARDIDFASQLSRVLENGRPDG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
SGIALTLTSARHIPAQNVQPPSLDLLFRVPDQPSLDGNTVNMNRERTQFADNSLRYQTDL
CCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCHHHHHCCCCEEEEHHH
TVLSGQIKNMMAVLQQG
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDKLDAAFRFQQDALNLRAQRQEILAANIANADTPGYQARDIDFASQLSRVLENGRPDG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
SGIALTLTSARHIPAQNVQPPSLDLLFRVPDQPSLDGNTVNMNRERTQFADNSLRYQTDL
CCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCHHHHHCCCCEEEEHHH
TVLSGQIKNMMAVLQQG
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA